RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 IGKV5-2P06315 115 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 IGHV4-34P06331 123 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CDK1P06493 297 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 DTYMKP23919 212 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 PRSS3P35030 304 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CXCL5P42830 114 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 LGALS7P47929 136 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 MRPS25P82663 173 aaKnown RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 PRDX1Q06830 199 aaKnown RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 PPIDQ08752 370 aaKnown RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 FAM53BQ14153 422 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 PMVKQ15126 192 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 C4orf26Q17RF5 130 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 HLA-DRB5Q30154 266 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 AKIRIN2Q53H80 203 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 SYPL2Q5VXT5 272 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 OTPQ5XKR4 325 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CEMP1Q6PRD7 247 aaPredicted RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 CD200R1LQ6Q8B3 271 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 LRRN1Q6UXK5 716 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 MDP1Q86V88 176 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 WDFY1Q8IWB7 410 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CPNE9Q8IYJ1 553 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 RNF175Q8N4F7 328 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 SLC26A10Q8NG04 563 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 OR5D18Q8NGL1 313 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 ZNF420Q8TAQ5 688 aaPredicted RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 ENKURQ8TC29 256 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 EXOSC8Q96B26 276 aaKnown RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 SMIM12Q96EX1 92 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 SMIM8Q96KF7 97 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 KCNS1Q96KK3 526 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 OR4K3Q96R72 315 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 STACQ99469 402 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 C9orf16Q9BUW7 83 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CHAC1Q9BUX1 264 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 SLC22A4Q9H015 551 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CDC42EP4Q9H3Q1 356 aaKnown RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 TPK1Q9H3S4 243 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 POMKQ9H5K3 350 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 ZNF225Q9UK10 706 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 SNX10Q9Y5X0 201 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 MYO15BQ96JP2 1530 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 MN1Q10571 1320 aaPredicted RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 ARHGAP23Q9P227 1491 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CHD2O14647 1828 aaKnown RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 IGLV11-55A0A075B6I3 123 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 ZNF705GA8MUZ8 300 aaPredicted RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 KRBOX1C9JBD0 128 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 INS-IGF2F8WCM5 200 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 UPK1AO00322 258 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 AZIN1O14977 448 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 ACOX3O15254 700 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CD5LO43866 347 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 SS18L1O75177 396 aaPredicted RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 VAMP5O95183 116 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 SLC25A14O95258 325 aaPredicted RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 MT-ND4P03905 459 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 AKR1C4P17516 323 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 GRPRP30550 384 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 NUDT1P36639 197 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 IFNGR2P38484 337 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CD79BP40259 229 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 PSMD7P51665 324 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 ZNF136P52737 540 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CRISP3P54108 245 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CCL7P80098 99 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CYP24A1Q07973 514 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 DAZ2Q13117 558 aaKnown RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 IL17AQ16552 155 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 ACSM3Q53FZ2 586 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 ACTBL2Q562R1 376 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 SPIN4Q56A73 249 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 Q6ZSR6 202 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 NCCRP1Q6ZVX7 275 aaPredicted RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 TGIF2LYQ8IUE0 185 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 DRAM1Q8N682 238 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 DCAF4L2Q8NA75 395 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 OR8K1Q8NGG5 319 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 PHOSPHO2Q8TCD6 241 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 C22orf15Q8WYQ4 148 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 ELSPBP1Q96BH3 223 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 TM4SF18Q96CE8 201 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 IMMP1LQ96LU5 166 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CCDC42Q96M95 316 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 SPACA5Q96QH8 159 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 CAMK2N2Q96S95 79 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 NRTNQ99748 197 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 TMEM208Q9BTX3 173 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 VCX3BQ9H321 246 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 METTL17Q9H7H0 456 aaPredicted RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 SLC40A1Q9NP59 571 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 DAZ3Q9NR90 486 aaKnown RBP2.41□□□□□ -2.02
SPG11-218ENST00000559754 FAM206AQ9NX38 181 aa2.41□□□□□ -2.02
SPG11-218ENST00000559754 SNAPC4Q5SXM2 1469 aa2.4□□□□□ -2.02
SPG11-218ENST00000559754 SETD1AO15047 1707 aaKnown RBP2.4□□□□□ -2.02
SPG11-218ENST00000559754 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.4□□□□□ -2.03
SPG11-218ENST00000559754 TRAV8-2A0A0B4J237 113 aa2.4□□□□□ -2.03
SPG11-218ENST00000559754 CCL15-CCL14A0A0B4J2E2 113 aa2.4□□□□□ -2.03
SPG11-218ENST00000559754 A0A1W2PQL4 384 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms