RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 AMDHD2Q9Y303 409 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 MS4A18H0YCH9 400 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 SPRY1O43609 319 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 ZIC3O60481 467 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 CST2P09228 141 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 GNG3P63215 75 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 MS4A18Q3C1V0 323 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF770Q6IQ21 691 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 SKA3Q8IX90 412 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 SLC26A10Q8NG04 563 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 OR4S1Q8NGB4 309 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 MARCH1Q8TCQ1 289 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 SRXN1Q9BYN0 137 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 PLK3Q9H4B4 646 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 OPA3Q9H6K4 179 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 MRM2Q9UI43 246 aaKnown RBP9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 NEUROG3Q9Y4Z2 214 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 FAM221AA4D161 298 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 SH2D1BO14796 132 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 JTBO76095 146 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 SFTA3P0C7M3 94 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 CTSSP25774 331 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 LIMK1P53667 647 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 F2RL1P55085 397 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 LGALS4P56470 323 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 PJVKQ0ZLH3 352 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 P2RY6Q15077 328 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 MRGPRGQ86SM5 289 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 TOLLIPQ9H0E2 274 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 HAO2Q9NYQ3 351 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 TINAGQ9UJW2 476 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 FAM74A7A6NL05 159 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 ADAM10O14672 748 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 GSTZ1O43708 216 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 LIMS1P48059 325 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 FUT6P51993 359 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 EGR4Q05215 589 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 FAM74A3Q4VXF1 159 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 DMKNQ6E0U4 476 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 OVCH2Q7RTZ1 564 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 GLRX5Q86SX6 157 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 MDP1Q86V88 176 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 LILRB1Q8NHL6 650 aaPredicted RBP9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 SECTM1Q8WVN6 248 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 NMNAT2Q9BZQ4 307 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 OR2H1Q9GZK4 316 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 TUBG2Q9NRH3 451 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 DEPPQ9NTK1 212 aa9.34□□□□□ -0.91
CARMIL3-202ENST00000559694 DHRS3O75911 302 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 HRH1P35367 487 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 MFGE8Q08431 387 aaPredicted RBP9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 MPPED2Q15777 294 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 MALSU1Q96EH3 234 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 TAAR3PQ9P1P4 343 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 ST3GAL6Q9Y274 331 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 SIRT4Q9Y6E7 314 aaPredicted RBP9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 RAMP1O60894 148 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 CRYBA1P05813 215 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 EPHA1P21709 976 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 THBS4P35443 961 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 INO80CQ6PI98 192 aaPredicted RBP9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 LILRB2Q8N423 598 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 MRPS18AQ9NVS2 196 aaKnown RBP9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 TAAR5O14804 337 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 CTDSPLO15194 276 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 SPINT2O43291 252 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 NEURL1O76050 574 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 HLA-DQB1P01920 261 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 SPP1P10451 314 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 FCGR2CP31995 323 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 CRYBA2P53672 197 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 NUFIP2Q7Z417 695 aaKnown RBP9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 STPG2Q8N412 459 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF251Q9BRH9 671 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 RTN4RQ9BZR6 473 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 GAR1Q9NY12 217 aaKnown RBP9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 KIF26BQ2KJY2 2108 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 OBSL1O75147 1896 aa9.33□□□□□ -0.92
CARMIL3-202ENST00000559694 CD300LBA8K4G0 201 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 GLI4P10075 376 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 TDGF1P13385 188 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 RPS2P15880 293 aaKnown RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 FAM27BQ5VT28 67 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 IL34Q6ZMJ4 242 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 OR8B12Q8NGG6 310 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 PHYHIPLQ96FC7 376 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 MS4A3Q96HJ5 214 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 MIOXQ9UGB7 285 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF391Q9UJN7 358 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 MFSD2BA6NFX1 497 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 CYTIPO60759 359 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 ADAM11O75078 769 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 TMEM127O75204 238 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 CD37P11049 281 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 RPL12P30050 165 aaKnown RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF85Q03923 595 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 PRDX4Q13162 271 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 PDCD1Q15116 288 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 CLEC9AQ6UXN8 241 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms