RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	MPIG6B	O95866	241 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	HAND1	O96004	215 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ZNF44	P15621	663 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ZNF16	P17020	682 aa	Predicted RBP	10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	AMY2B	P19961	511 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	GABRR1	P24046	479 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	PITPNB	P48739	271 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	LMO4	P61968	165 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	COL10A1	Q03692	680 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	LOXL1	Q08397	574 aa	Predicted RBP	10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	KCNJ8	Q15842	424 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	DGUOK	Q16854	277 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	C1orf100	Q5SVJ3	147 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	GDPGP1	Q6ZNW5	385 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	NLRC3	Q7RTR2	1065 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	LYPD6	Q86Y78	171 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ANKRD13B	Q86YJ7	626 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	TMEM104	Q8NE00	496 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	OR51D1	Q8NGF3	324 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ANGPTL6	Q8NI99	470 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	NDNF	Q8TB73	568 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	RAB39B	Q96DA2	213 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	NEIL1	Q96FI4	390 aa	Predicted RBP	10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	SMR3A	Q99954	134 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	TMUB1	Q9BVT8	246 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	SELENOI	Q9C0D9	397 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	CHST6	Q9GZX3	395 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	PATZ1	Q9HBE1	687 aa	Known RBP	10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ING3	Q9NXR8	418 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ZNF581	Q9P0T4	197 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	MIOX	Q9UGB7	285 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ACAN	P16112	2415 aa		10.36	□□□□□ -0.75
GABPB1-208	ENST00000558970	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970		A0A0G2JK05	382 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	MEX3A	A1L020	520 aa	Known RBP	10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	DVL1	O14640	695 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	SLC22A1	O15245	554 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	KNG1	P01042	644 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	HEXA	P06865	529 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	ARSB	P15848	533 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	MGMT	P16455	207 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	NDUFB7	P17568	137 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	PRDX2	P32119	198 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	RPS19	P39019	145 aa	Known RBP	10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	FGF12	P61328	243 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	GNB2	P62879	340 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	IL13RA1	P78552	427 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	PLA2G7	Q13093	441 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	CTF1	Q16619	201 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	TMEM249	Q2WGJ8	235 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	ESCO2	Q56NI9	601 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	IDNK	Q5T6J7	187 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	SFXN4	Q6P4A7	337 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	ZNF788	Q6ZQV5	615 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	SLC36A1	Q7Z2H8	476 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	CDH26	Q8IXH8	852 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	OSR2	Q8N2R0	312 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	TBC1D15	Q8TC07	691 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	H1FX	Q92522	213 aa	Known RBP	10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	SLC25A28	Q96A46	364 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	C12orf43	Q96C57	262 aa	Known RBP	10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	C1orf147	Q96MC9	270 aa	Predicted RBP	10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	LIN7B	Q9HAP6	207 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	CLN8	Q9UBY8	286 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	STEAP1	Q9UHE8	339 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	ZNF222	Q9UK12	451 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	ST3GAL6	Q9Y274	331 aa		10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	FLNA	P21333	2647 aa	Known RBP	10.35	□□□□□ -0.75
GABPB1-208	ENST00000558970	IFITM5	A6NNB3	132 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	NOTO	A8MTQ0	251 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	GEMIN2	O14893	280 aa	Known RBP	10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	NDUFB3	O43676	98 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	FCN3	O75636	299 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	OR2H2	O95918	312 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	ACAA1	P09110	424 aa	Predicted RBP	10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	WNT2	P09544	360 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	VSIG8	P0DPA2	414 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	GTF2F2	P13984	249 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	CD99	P14209	185 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	SNRPB	P14678	240 aa	Known RBP	10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	PSMD7	P51665	324 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	RBM11	P57052	281 aa	Known RBP	10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	UNC119	Q13432	240 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	EDDM3A	Q14507	147 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	SPCS2	Q15005	226 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	TAF9	Q16594	264 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	ATAD3C	Q5T2N8	411 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	ASCL4	Q6XD76	172 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	TPRA1	Q86W33	373 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	FAM3D	Q96BQ1	224 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	CYYR1	Q96J86	154 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	C18orf12	Q96KH6	178 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	COX4I2	Q96KJ9	171 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	CST11	Q9H112	138 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	GLS2	Q9UI32	602 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	MAB21L2	Q9Y586	359 aa		10.34	□□□□□ -0.75
GABPB1-208	ENST00000558970	TMEM272	A0A1B0GTI8	110 aa		10.33	□□□□□ -0.76
GABPB1-208	ENST00000558970		F5H0A9	414 aa	Predicted RBP	10.33	□□□□□ -0.76

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