RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SDSLQ96GA7 329 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 DUX5Q96PT3 197 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 GPHA2Q96T91 129 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 DCTN5Q9BTE1 182 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 C1orf43Q9BWL3 253 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 MS4A7Q9GZW8 240 aaPredicted RBP4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 ELL3Q9HB65 397 aaPredicted RBP4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 HES4Q9HCC6 221 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 INPP5EQ9NRR6 644 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 SLC25A10Q9UBX3 287 aaPredicted RBP4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 RPL36Q9Y3U8 105 aaKnown RBP4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 DSCAML1Q8TD84 2053 aa4.95□□□□□ -1.62
CTDSPL2-204ENST00000558966 CENPVL3A0A0U1RRI6 287 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 DNAJC9-AS1A6NH13 148 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 RFPL4AA6NLU0 287 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 RFPL4AL1F8VTS6 287 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 F8VVB4 439 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 F8VWA3 439 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 TRIM77I1YAP6 450 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 GATBO75879 557 aaKnown RBP4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 CD1AP06126 327 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 FUT6P51993 359 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 DLX1P56177 255 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 CAV3P56539 151 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 IL24Q13007 206 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 SMIM21Q3B7S5 101 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 LRRC10Q5BKY1 277 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 KHDC1LQ5JSQ8 128 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 GPR157Q5UAW9 335 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 RUSC1-AS1Q66K80 236 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 CD177Q8N6Q3 437 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 FAM216AQ8WUB2 273 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 CYGBQ8WWM9 190 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 H1FXQ92522 213 aaKnown RBP4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 FGGYQ96C11 551 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 MED30Q96HR3 178 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 PKIBQ9C010 78 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 FGF20Q9NP95 211 aaPredicted RBP4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 C8orf4Q9NR00 106 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 RASL12Q9NYN1 266 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 MTCH1Q9NZJ7 389 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 SLC7A11Q9UPY5 501 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 POLDIP2Q9Y2S7 368 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 KPTNQ9Y664 436 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 F2RL2O00254 374 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 NXPH2O95156 264 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZFPL1O95159 310 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 GNAO1P09471 354 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZNF20P17024 532 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 NDUFB7P17568 137 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 ATF1P18846 271 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 AZGP1P25311 298 aaKnown RBP4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 PRDX2P32119 198 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 ETV1P50549 477 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 PRB3Q04118 309 aaPredicted RBP4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 DEFB112Q30KQ8 113 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 KLHL22Q53GT1 634 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 TTC23Q5W5X9 447 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 XAF1Q6GPH4 301 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 LAIR2Q6ISS4 152 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 CRIP3Q6Q6R5 217 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 SLC25A26Q70HW3 274 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 UTS2BQ765I0 119 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 RNF144BQ7Z419 303 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 VMO1Q7Z5L0 202 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 EGFL6Q8IUX8 553 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 DHRSXQ8N5I4 330 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 KIR3DL3Q8N743 410 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 Q8N7P7 452 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZNF676Q8N7Q3 588 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 DNAAF1Q8NEP3 725 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 TMEM185AQ8NFB2 350 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 RPS4Y2Q8TD47 263 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 LHX4Q969G2 390 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 SLAMF9Q96A28 289 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 BORCS8Q96FH0 119 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 MRPL48Q96GC5 212 aaKnown RBP4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 CEP19Q96LK0 163 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 PDCD1LG2Q9BQ51 273 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 PRDM13Q9H4Q3 707 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 C19orf12Q9NSK7 152 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 ONECUT1Q9UBC0 465 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 IL36RNQ9UBH0 155 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 NKX1-2Q9UD57 310 aaPredicted RBP4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 HHLA2Q9UM44 414 aa4.94□□□□□ -1.62
CTDSPL2-204ENST00000558966 IGHV1-69DA0A0B4J2H0 117 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 TMEM89A2RUT3 159 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 TMEM212A6NML5 194 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 INMTO95050 263 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 SERPINA3P01011 423 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 IGHV1-69P01742 117 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 PRTN3P24158 256 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 DCKP27707 260 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 CAPGP40121 348 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 POU3F4P49335 361 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 RBP2P50120 134 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 GTF2A1P52655 376 aaPredicted RBP4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 BPIFB3P59826 476 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 ACTG1P63261 375 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 BAMBIQ13145 260 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms