RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 MICBQ29980 383 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 MKXQ8IYA7 352 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 OSR2Q8N2R0 312 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 BCL2L2Q92843 193 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 POM121L2Q96KW2 1035 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 PECRQ9BY49 303 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 RGCCQ9H4X1 137 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 IFT22Q9H7X7 185 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 RAXQ9Y2V3 346 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 TTLL8A6PVC2 850 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 SYNGR1O43759 233 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 KIR2DL2P43627 348 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 AKR1C2P52895 323 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 AKR1C1Q04828 323 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 SNTB1Q13884 538 aaKnown RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 SHEQ5VZ18 495 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 ATRAIDQ6UW56 229 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 GFRALQ6UXV0 394 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 SLC25A40Q8TBP6 338 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 CCDC107Q8WV48 283 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 AQP3Q92482 292 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 PRRT1Q99946 306 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 KIF25Q9UIL4 384 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 IGKV1-12A0A0C4DH73 117 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 TIMM8AO60220 97 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 SSX5O60225 188 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 IGKV1D-12P01611 117 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 SEC61A1P61619 476 aaKnown RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PPP1CBP62140 327 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 HOXA4Q00056 320 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PDZK1IP1Q13113 114 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 SWI5Q1ZZU3 235 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PRR30Q53SZ7 412 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 OR2W3Q7Z3T1 314 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 RBMXL3Q8N7X1 1067 aaKnown RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 CLRN3Q8NCR9 226 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 MSL2Q9HCI7 577 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 LHX6Q9UPM6 363 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 AQP7O14520 342 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 S100A9P06702 114 aaKnown RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 SULT1A3P0DMM9 295 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 SULT1A4P0DMN0 295 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 S100A11P31949 105 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PTGER4P35408 488 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 MEF2DQ14814 521 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 FAM189A2Q15884 450 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 FAM74A1Q5RGS3 127 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 GLDNQ6ZMI3 551 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 C1orf147Q96MC9 270 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 C1QTNF5Q9BXJ0 243 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 CLCF1Q9UBD9 225 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PRELID3BQ9Y3B1 194 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 SHANK1Q9Y566 2161 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 OR4E1P0C645 316 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PVALBP20472 110 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 CD34P28906 385 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 C5orf24Q7Z6I8 188 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 C2CD4CQ8TF44 421 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PRDM14Q9GZV8 571 aa9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 RYDENQ9NUL5 291 aaKnown RBP9.31□□□□□ -0.92
CSPG4P5-201ENST00000558731 PTPRBP23467 1997 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 A0A0A6YYH2 397 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 A6NJ64 397 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 FAM74A7A6NL05 159 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 F8VVB4 439 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 F8VWA3 439 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 CRYABP02511 175 aaKnown RBP9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 QRFPP83859 136 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 FAM74A3Q4VXF1 159 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 GSG1LQ6UXU4 331 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 IL1F10Q8WWZ1 152 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 EMG1Q92979 244 aaKnown RBP9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 SULT4A1Q9BR01 284 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 AK3Q9UIJ7 227 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 TEX13DA0A0J9YY54 714 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 SULT1C2O00338 296 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 PRRG2O14669 202 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 PRAF2O60831 178 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 IGHG3P01860 377 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 GLAP06280 429 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 NMBP08949 121 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 GSTP1P09211 210 aaKnown RBP9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 CXCL2P19875 107 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 GCH1P30793 250 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 ATPAF1Q5TC12 328 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 OR2A2Q6IF42 318 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 SLC22A25Q6T423 547 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 Q6ZT83 130 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 ZFP82Q8N141 532 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 ADAD2Q8NCV1 583 aaKnown RBP9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 ACACBO00763 2458 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 A0A1B0GUH1 482 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 OR2AT4A6NND4 320 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 BEX5Q5H9J7 111 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 ZNF529Q6P280 563 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 SCARB1Q8WTV0 552 aa9.3□□□□□ -0.92
CSPG4P5-201ENST00000558731 WNT2BQ93097 391 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms