RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 FAM172BPA6NC97 362 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 OOSP1A8MZH6 123 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 MGST3O14880 152 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 ARPC2O15144 300 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 ZNF254O75437 659 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 E2F6O75461 281 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 MMP23AO75900 390 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 HAND1O96004 215 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 IGLV3-1P01715 115 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 SNRNP70P08621 437 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 HSD17B1P14061 328 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 CDK2P24941 298 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 RIDAP52758 137 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 HES1Q14469 280 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 RBM39Q14498 530 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 KPNB1Q14974 876 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 MICAQ29983 383 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 EMG1Q92979 244 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 SLAMF9Q96A28 289 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 ZMAT4Q9H898 229 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 NUFIP1Q9UHK0 495 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 IKZF2Q9UKS7 526 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 U3KQV3 271 aa14.06□□□□□ -0.16
TSPAN3-204ENST00000558394 A6NIN4 97 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 BUB1B-PAK6H3BSN5 160 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 SASH3O75995 380 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 IGLV1-47P01700 117 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 IGHA1P01876 353 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 HCCSP53701 268 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 HLA-DRB5Q30154 266 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 SLC35D3Q5M8T2 416 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 TEX38Q6PEX7 206 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 BAIAP2L2Q6UXY1 529 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 HEPN1Q6WQI6 88 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 SLC35E3Q7Z769 313 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 RPEQ96AT9 228 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 REEP1Q9H902 201 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 PCDHB16Q9NRJ7 776 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 MTCH1Q9NZJ7 389 aa14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 SAMHD1Q9Y3Z3 626 aaKnown RBP14.05□□□□□ -0.16
TSPAN3-204ENST00000558394 FUOMA2VDF0 154 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 LOC110117498-PIK3R3F6TDL0 507 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 F8VVB4 439 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 F8VWA3 439 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 TTRP02766 147 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 P2RX3P56373 397 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 DEFB136Q30KP8 78 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 ZNF260Q3ZCT1 412 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 ZFAND6Q6FIF0 208 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 LCNL1Q6ZST4 164 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 THNSL2Q86YJ6 484 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 ZNF679Q8IYX0 411 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 OR52N4Q8NGI2 321 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 CADM1Q9BY67 442 aaKnown RBP14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 YIPF3Q9GZM5 350 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 DCLRE1BQ9H816 532 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 PLEKHA1Q9HB21 404 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 SIRT4Q9Y6E7 314 aaPredicted RBP14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 V9GYS6 101 aa14.04□□□□□ -0.16
TSPAN3-204ENST00000558394 HMGN1P05114 100 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 TMEM11P17152 192 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 CXorf66Q5JRM2 361 aaPredicted RBP14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 BCL2L15Q5TBC7 163 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 CPOQ8IVL8 374 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 SBSPONQ8IVN8 264 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 Q8IYB0 196 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 STPG2Q8N412 459 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 C5orf56Q8N8D9 126 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 OR4D6Q8NGJ1 314 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 ASB17Q8WXJ9 295 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 TOMM40LQ969M1 308 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 HRASLS5Q96KN8 279 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 NIPSNAP1Q9BPW8 284 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 GON7Q9BXV9 100 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 MOB1AQ9H8S9 216 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 ZNF286AQ9HBT8 521 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 TAS2R3Q9NYW6 316 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 TMEM14AQ9Y6G1 99 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 DNAH7Q8WXX0 4024 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 SORL1Q92673 2214 aa14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 HUWE1Q7Z6Z7 4374 aaKnown RBP14.03□□□□□ -0.16
TSPAN3-204ENST00000558394 FGF16O43320 207 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 PSPNO60542 156 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 CYB5AP00167 134 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 CD34P28906 385 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 ACTR3P61158 418 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 ROM1Q03395 351 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 MFGE8Q08431 387 aaPredicted RBP14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 KIR2DS1Q14954 304 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 PNLIPRP3Q17RR3 467 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 SLC25A26Q70HW3 274 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 OR10G2Q8NGC3 310 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 OR14K1Q8NGZ2 314 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 OR56B4Q8NH76 319 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 TEX12Q9BXU0 123 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 TTTY10Q9BZA0 68 aa14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 SEBOXQ9HB31 216 aaPredicted RBP14.02□□□□□ -0.17
TSPAN3-204ENST00000558394 SCOCQ9UIL1 159 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms