RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 PDZK1IP1Q13113 114 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 ALKBH1Q13686 389 aaKnown RBP8.24□□□□□ -1.09
USP3-207ENST00000558218 ZNF146Q15072 292 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 TAF9Q16594 264 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 SPIN3Q5JUX0 258 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 C11orf88Q6PI97 169 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 SLC25A26Q70HW3 274 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 GDPD3Q7L5L3 318 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 SAXO1Q8IYX7 474 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 RDH10Q8IZV5 341 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 OR8H2Q8N162 312 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 OR5D14Q8NGL3 314 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 LINC01006Q8NI28 216 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 TRMT10AQ8TBZ6 339 aaKnown RBP8.24□□□□□ -1.09
USP3-207ENST00000558218 FGGYQ96C11 551 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 LGALS12Q96DT0 336 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 ADAT3Q96EY9 351 aaPredicted RBP8.24□□□□□ -1.09
USP3-207ENST00000558218 PELI1Q96FA3 418 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 SLC29A1Q99808 456 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 CITED1Q99966 193 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 JAM3Q9BX67 310 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 ELL3Q9HB65 397 aaPredicted RBP8.24□□□□□ -1.09
USP3-207ENST00000558218 RAB18Q9NP72 206 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 TNFRSF19Q9NS68 423 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 FAM118AQ9NWS6 357 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 OR14J1Q9UGF5 321 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 RNF114Q9Y508 228 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 IGKV1-9A0A0C4DH69 117 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 hADV38S2A0JD32 116 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 IRGMA1A4Y4 181 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 FUOMA2VDF0 154 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 FAM90A8PA6NJQ4 464 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 TMEM212A6NML5 194 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 VGLL3A8MV65 326 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 J3QLW9 94 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 TIMM23O14925 209 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ANGPTL7O43827 346 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 IGLV1-40P01703 118 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 CCDC159P0C7I6 412 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ZNF728P0DKX0 622 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ZNF19P17023 458 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ZNF20P17024 532 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 AZGP1P25311 298 aaKnown RBP8.23□□□□□ -1.09
USP3-207ENST00000558218 LMO1P25800 156 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 PEX2P28328 305 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ERP29P30040 261 aaKnown RBP8.23□□□□□ -1.09
USP3-207ENST00000558218 DLX6P56179 175 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 PROK1P58294 105 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 COL10A1Q03692 680 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ZNF91Q05481 1191 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 DHRS7BQ6IAN0 325 aaPredicted RBP8.23□□□□□ -1.09
USP3-207ENST00000558218 SERPINA12Q8IW75 414 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 FAM58AQ8N1B3 248 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 PARP16Q8N5Y8 322 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ZNF555Q8NEP9 628 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 OR11H6Q8NGC7 330 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 OR13D1Q8NGV5 346 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 MALSU1Q96EH3 234 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 AJUBAQ96IF1 538 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 C4orf36Q96KX1 117 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 OPALINQ96PE5 141 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 CITED4Q96RK1 184 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 SSX3Q99909 188 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ZNF649Q9BS31 505 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ALG8Q9BVK2 526 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ZCCHC4Q9H5U6 513 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 ERVK13-1Q9NX77 482 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 FBLN5Q9UBX5 448 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 TBL2Q9Y4P3 447 aaKnown RBP8.23□□□□□ -1.09
USP3-207ENST00000558218 PCDHGB5Q9Y5G0 923 aa8.23□□□□□ -1.09
USP3-207ENST00000558218 DSCAML1Q8TD84 2053 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 MGAM2Q2M2H8 2515 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 F8VVB4 439 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 F8VWA3 439 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 SH2D1BO14796 132 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 MGST3O14880 152 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 KDM4BO94953 1096 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 HAND1O96004 215 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 OCM2P0CE71 109 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 OCMP0CE72 109 aaPredicted RBP8.22□□□□□ -1.09
USP3-207ENST00000558218 DCKP27707 260 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 KIR2DS4P43632 304 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 BMXP51813 675 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 GBX2P52951 348 aaPredicted RBP8.22□□□□□ -1.09
USP3-207ENST00000558218 KLRD1Q13241 179 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 LRRC75BQ2VPJ9 315 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 CCDC58Q4VC31 144 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 Q6ZSV7 163 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 LHFPL3Q86UP9 236 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 ZNF676Q8N7Q3 588 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 ASCC1Q8N9N2 400 aaKnown RBP8.22□□□□□ -1.09
USP3-207ENST00000558218 OR4M1Q8NGD0 313 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 OR13C3Q8NGS6 347 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 EMG1Q92979 244 aaKnown RBP8.22□□□□□ -1.09
USP3-207ENST00000558218 SLAMF9Q96A28 289 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 CPNE2Q96FN4 548 aaPredicted RBP8.22□□□□□ -1.09
USP3-207ENST00000558218 COMMD4Q9H0A8 199 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 RANBP3Q9H6Z4 567 aaPredicted RBP8.22□□□□□ -1.09
USP3-207ENST00000558218 HMG20AQ9NP66 347 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 FGF20Q9NP95 211 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms