RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 FGF17O60258 216 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 GPR75O95800 540 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 AMY2BP19961 511 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 GLRA1P23415 457 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 RPS27P42677 84 aaKnown RBP9.53□□□□□ -0.88
USP3-206ENST00000558157 HSF1Q00613 529 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 RPL18Q07020 188 aaKnown RBP9.53□□□□□ -0.88
USP3-206ENST00000558157 MGAT2Q10469 447 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 ZNF774Q6NX45 483 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 TMEM182Q6ZP80 229 aaPredicted RBP9.53□□□□□ -0.88
USP3-206ENST00000558157 C10orf53Q8N6V4 93 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 CYB561D1Q8N8Q1 229 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 SEMA6DQ8NFY4 1073 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 OR4X1Q8NH49 305 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.53□□□□□ -0.88
USP3-206ENST00000558157 OIT3Q8WWZ8 545 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 OR6C1Q96RD1 312 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.53□□□□□ -0.881e-7■□□□□ 9.5
USP3-206ENST00000558157 B9D1Q9UPM9 204 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 LRP12Q9Y561 859 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 XKRYO14609 159 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 CSTAP01040 98 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 PI3P19957 117 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 TLE4Q04727 773 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 C1QL3Q5VWW1 255 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 DEGS2Q6QHC5 323 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 OR52N5Q8NH56 324 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 SH3BGRL3Q9H299 93 aa9.53□□□□□ -0.88
USP3-206ENST00000558157 OTOGLQ3ZCN5 2332 aa9.52□□□□□ -0.88
USP3-206ENST00000558157 NSG1A0A0A6YYJ2 146 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 H0YIG0 161 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 H7C1C5 153 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 ITGB1BP1O14713 200 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 GEMIN2O14893 280 aaKnown RBP9.52□□□□□ -0.89
USP3-206ENST00000558157 OR6A2O95222 327 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 TIAF1O95411 115 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 HLA-DQA2P01906 255 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 MBPP02686 304 aaPredicted RBP9.52□□□□□ -0.89
USP3-206ENST00000558157 CTSDP07339 412 aaPredicted RBP9.52□□□□□ -0.89
USP3-206ENST00000558157 KLK2P20151 261 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 PTGER4P35408 488 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 OR1D4P47884 311 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 LCN6P62502 163 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 PRDX4Q13162 271 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 C4orf17Q53FE4 359 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 C1orf189Q5VU69 101 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 C1orf140Q5VVS0 124 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 PLXDC2Q6UX71 529 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 ATG4DQ86TL0 474 aaPredicted RBP9.52□□□□□ -0.89
USP3-206ENST00000558157 SLC26A10Q8NG04 563 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 KCNG3Q8TAE7 436 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 NPRL2Q8WTW4 380 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 PYGO2Q9BRQ0 406 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 CABLES2Q9BTV7 478 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 LPAR5Q9H1C0 372 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 GAL3ST2Q9H3Q3 398 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 GPR84Q9NQS5 396 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 OCIAD1Q9NX40 245 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 IL17BQ9UHF5 180 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 FER1L5A0AVI2 2057 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 SERINC4A6NH21 518 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 CRYM-AS1A6NIL9 109 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 HSPA12AO43301 675 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 GDF9O60383 454 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 CSNK1A1P48729 337 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 FOXK1P85037 733 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 PSG6Q00889 435 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 ZFP36L1Q07352 338 aaKnown RBP9.52□□□□□ -0.89
USP3-206ENST00000558157 EXOSC7Q15024 291 aaKnown RBP9.52□□□□□ -0.89
USP3-206ENST00000558157 PPP1R14AQ96A00 147 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 MRGPRX4Q96LA9 322 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 ABHD6Q9BV23 337 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 G6PC2Q9NQR9 355 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 CBLN4Q9NTU7 201 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 P4HTMQ9NXG6 502 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
USP3-206ENST00000558157 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.51□□□□□ -0.89
USP3-206ENST00000558157 A0A1B0GX78 115 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 XKRY2A2RUG3 117 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 FGF5P12034 268 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 FUT3P21217 361 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 NBL1P41271 181 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 BPIFB3P59826 476 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 FOXF1Q12946 379 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 TRA2AQ13595 282 aaKnown RBP eCLIP9.51□□□□□ -0.89
USP3-206ENST00000558157 ARL6IP1Q15041 203 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 RTL6Q6ICC9 239 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 SULF2Q8IWU5 870 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 OR5D14Q8NGL3 314 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 OR2G3Q8NGZ4 309 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 CLDND2Q8NHS1 167 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 POC1BQ8TC44 478 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 ADAMTS18Q8TE60 1221 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 RIMS4Q9H426 269 aaPredicted RBP9.51□□□□□ -0.89
USP3-206ENST00000558157 DECR2Q9NUI1 292 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 EHFQ9NZC4 300 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 AK3Q9UIJ7 227 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 RARRES3Q9UL19 164 aa9.51□□□□□ -0.89
USP3-206ENST00000558157 TRAV1-1A0A0B4J248 108 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms