RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SPSB1Q96BD6 273 aa7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 OPALINQ96PE5 141 aa7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 SPACA5Q96QH8 159 aa7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 MYCBPQ99417 103 aaPredicted RBP7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 JAM3Q9BX67 310 aa7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 DPAGT1Q9H3H5 408 aa7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 RBFOX1Q9NWB1 397 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 ZNRD1Q9P1U0 126 aa7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 CAB39Q9Y376 341 aaPredicted RBP7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 SF3B6Q9Y3B4 125 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-206ENST00000558059 IGKV1-12A0A0C4DH73 117 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 TRBV2A0A0J9YWF9 115 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 TMEM212A6NML5 194 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 C17orf98A8MV24 154 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 SPRY1O43609 319 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 ANGPTL7O43827 346 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 ALX3O95076 343 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 HAND1O96004 215 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 IGKV1D-12P01611 117 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 CRYBA1P05813 215 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 CALCBP10092 127 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 PIPP12273 146 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 DUSP1P28562 367 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 POU3F4P49335 361 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 ETV1P50549 477 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 GTF2A1P52655 376 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 RPL15P61313 204 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 ADARB1P78563 741 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 MRPL28Q13084 256 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 ZNF146Q15072 292 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 LRRC36Q1X8D7 754 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 MIDNQ504T8 468 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 C17orf107Q6ZR85 190 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 TCF23Q7RTU1 214 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 Q8IYB0 196 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 OR8H2Q8N162 312 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 PARP16Q8N5Y8 322 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 ASCC1Q8N9N2 400 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 BEND2Q8NDZ0 799 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 OR52N4Q8NGI2 321 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 OR13C9Q8NGT0 318 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 OR4F5Q8NH21 305 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 OR5AK2Q8NH90 309 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 CNIH3Q8TBE1 160 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 EMG1Q92979 244 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 RFT1Q96AA3 541 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 SNX22Q96L94 193 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 PDCD1LG2Q9BQ51 273 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 OCSTAMPQ9BR26 566 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 SLITRK2Q9H156 845 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 ZCCHC4Q9H5U6 513 aa7.15□□□□□ -1.26
SNRPA1-206ENST00000558059 A0A1B0GUS0 222 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 A0A1W2PPH5 198 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 MEX3AA1L020 520 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 CLPSL1A2RUU4 121 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 PSPNO60542 156 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 KDM4BO94953 1096 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 CYB5AP00167 134 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 PAHP00439 452 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 RPSAP08865 295 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 CCDC159P0C7I6 412 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 PAX6P26367 422 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 DCKP27707 260 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 PEX2P28328 305 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 GBX2P52951 348 aaPredicted RBP7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 RCN1Q15293 331 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 TTC23Q5W5X9 447 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 OLFML2AQ68BL7 652 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 XAF1Q6GPH4 301 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 ASPHD2Q6ICH7 369 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 GDPD3Q7L5L3 318 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 DHRSXQ8N5I4 330 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 PACRGLQ8N7B6 248 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 ZSCAN4Q8NAM6 433 aaPredicted RBP7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 OR4S1Q8NGB4 309 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 RPS4Y2Q8TD47 263 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 CYGBQ8WWM9 190 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 RGP1Q92546 391 aaPredicted RBP7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 MEGF9Q9H1U4 602 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 HEXA-AS1Q9H8Q6 139 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 BEX1Q9HBH7 125 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 HMG20AQ9NP66 347 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 C8orf4Q9NR00 106 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 SIRT4Q9Y6E7 314 aaPredicted RBP7.14□□□□□ -1.27
SNRPA1-206ENST00000558059 hCG_1809904A0A1W2PP81 198 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 A0A1W2PPE2 198 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 A0A1W2PR64 198 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 A0A1W2PRV1 198 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 FAM90A8PA6NJQ4 464 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 ANKRD65E5RJM6 399 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 OGG1O15527 345 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 RBP4P02753 201 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 ZNF728P0DKX0 622 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 PRKACAP17612 351 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 GABRR1P24046 479 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 COX7A1P24310 79 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 LMO1P25800 156 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 OR3A1P47881 315 aa7.13□□□□□ -1.27
SNRPA1-206ENST00000558059 BMXP51813 675 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms