RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ORC6Q9Y5N6 252 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 CMYA5Q8N3K9 4069 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 A6NDX4 124 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 ODF3BA8MYP8 253 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 F8VVB4 439 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 F8VWA3 439 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 H3BSH0 61 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 SH2D1BO14796 132 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 MGST3O14880 152 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 HAND1O96004 215 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 RPSAP08865 295 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF20P17024 532 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 AZGP1P25311 298 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 ARHGDIBP52566 201 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 SLC34A1Q06495 639 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 SPIN3Q5JUX0 258 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 FAM58AQ8N1B3 248 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 OR4F17Q8NGA8 305 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 NDNFQ8TB73 568 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 CAPSLQ8WWF8 208 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 MRPL48Q96GC5 212 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 OR4F4Q96R69 305 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 RIBC2Q9H4K1 309 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 UBE2J1Q9Y385 318 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 SESN1Q9Y6P5 492 aa10.99□□□□□ -0.65
SNRPA1-204ENST00000558020 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 TRBV2A0A0J9YWF9 115 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 LOC107986453A0A1B0GWG9 222 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 DAPL1A0PJW8 107 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 TMEM82A0PJX8 343 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 MEGF11A6BM72 1044 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 SNTNA6NMZ2 147 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 APOL3O95236 402 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 ISG15P05161 165 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 HTR1DP28221 377 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 BRS3P32247 399 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF146Q15072 292 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 NSUN5P1Q3KNT7 163 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 FBLN7Q53RD9 439 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 LHFPL2Q6ZUX7 228 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 UTS2BQ765I0 119 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 TRAPPC6BQ86SZ2 158 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 TMEM219Q86XT9 240 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 NDUFA11Q86Y39 141 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 DYNAPQ8N1N2 210 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 PRSS35Q8N3Z0 413 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 EME1Q96AY2 570 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 SPSB1Q96BD6 273 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 AKR1E2Q96JD6 320 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 CLEC7AQ9BXN2 247 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 GABARAPL3Q9BY60 117 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 TMEM133Q9H2Q1 129 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 GAL3ST2Q9H3Q3 398 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 RHOFQ9HBH0 211 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 SERTAD4Q9NUC0 356 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 HILPDAQ9Y5L2 63 aa10.98□□□□□ -0.65
SNRPA1-204ENST00000558020 TRGV10A0A0A0MS01 117 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 MEX3AA1L020 520 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 G3V4G9 280 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 CIB2O75838 187 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 PRKACAP17612 351 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 ATF1P18846 271 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 ERP29P30040 261 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 POLR2IP36954 125 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 POU3F4P49335 361 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 KPNB1Q14974 876 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 TP53I3Q53FA7 332 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 KPRPQ5T749 579 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 MEDAGQ5VYS4 303 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 CCBE1Q6UXH8 406 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 RTN4RL2Q86UN3 420 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 RDH10Q8IZV5 341 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 OR2G2Q8NGZ5 317 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF596Q8TC21 504 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 STMN2Q93045 179 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 CREB3L1Q96BA8 519 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 FGGYQ96C11 551 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 R3HDM4Q96D70 268 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 CHST6Q9GZX3 395 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 OAZ3Q9UMX2 235 aa10.97□□□□□ -0.65
SNRPA1-204ENST00000558020 IGHV2-26A0A0B4J1V2 119 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 IGHA1P01876 353 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 DUSP1P28562 367 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 CEACAM3P40198 252 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 VDAC2P45880 294 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 NPBWR2P48146 333 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 CCR9P51686 369 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 P2RX3P56373 397 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 ISL1P61371 349 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF91Q05481 1191 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 PDZK1IP1Q13113 114 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 HABP2Q14520 560 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 FDX2Q6P4F2 183 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 C16orf82Q7Z2V1 217 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 ABHD12Q8N2K0 398 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 OR52N4Q8NGI2 321 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms