RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PPP3R1P63098 170 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 IL24Q13007 206 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 INSL4Q14641 139 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 KCNJ8Q15842 424 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 TEX36Q5VZQ5 186 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 ANGPTL5Q86XS5 388 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 FAM90A1Q86YD7 464 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 POC1AQ8NBT0 407 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 TBC1D15Q8TC07 691 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 SSMEM1Q8WWF3 244 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 SPACA5Q96QH8 159 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 WDR13Q9H1Z4 485 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 NEK6Q9HC98 313 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 SMURF1Q9HCE7 757 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 TNFRSF19Q9NS68 423 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 NDUFB11Q9NX14 153 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 C1RLQ9NZP8 487 aa13.72□□□□□ -0.21
NEK9-211ENST00000557673 SF3B6Q9Y3B4 125 aaKnown RBP13.72□□□□□ -0.21
NEK9-211ENST00000557673 TRAV8-7A0A075B6U6 113 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 TNFRSF13BO14836 293 aaPredicted RBP13.71□□□□□ -0.21
NEK9-211ENST00000557673 PIN1P1O15428 100 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 PSMA1P25786 263 aaKnown RBP13.71□□□□□ -0.21
NEK9-211ENST00000557673 PSMB9P28065 219 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 GABRA5P31644 462 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 POU3F4P49335 361 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 MTCP1P56278 107 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 SRSF4Q08170 494 aaKnown RBP13.71□□□□□ -0.21
NEK9-211ENST00000557673 TRAM1Q15629 374 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 RNF144BQ7Z419 303 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 ZNF671Q8TAW3 534 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 DYRK2Q92630 601 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 RFT1Q96AA3 541 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 SEH1LQ96EE3 360 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 ZNF488Q96MN9 340 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 NRIP2Q9BQI9 281 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 CHIAQ9BZP6 476 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 CKLFQ9UBR5 152 aa13.71□□□□□ -0.21
NEK9-211ENST00000557673 WNK1Q9H4A3 2382 aa13.71□□□□□ -0.22
NEK9-211ENST00000557673 MAGEA13PA6NCF6 341 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 NOS1APO75052 506 aaPredicted RBP13.7□□□□□ -0.22
NEK9-211ENST00000557673 GPX5O75715 221 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 INMTO95050 263 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 MUC1P15941 1255 aaPredicted RBP13.7□□□□□ -0.22
NEK9-211ENST00000557673 ZP1P60852 638 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 GMFBP60983 142 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 ACSM3Q53FZ2 586 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 FAM27D1Q5T7N8 215 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 STUMQ69YW2 141 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 UNQ9370/PRO34162Q6UXP9 181 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 SLC25A26Q70HW3 274 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 TSPAN14Q8NG11 270 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 TMEM203Q969S6 136 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 C12orf43Q96C57 262 aaKnown RBP13.7□□□□□ -0.22
NEK9-211ENST00000557673 CPNE2Q96FN4 548 aaPredicted RBP13.7□□□□□ -0.22
NEK9-211ENST00000557673 PCGF1Q9BSM1 259 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 HES4Q9HCC6 221 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 TMEM138Q9NPI0 162 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 RNF114Q9Y508 228 aa13.7□□□□□ -0.22
NEK9-211ENST00000557673 A0A1B0GW55 424 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 A0A1W2PPK0 400 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 TRIM64CA6NLI5 447 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 FCN3O75636 299 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 TOX4O94842 621 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 MELTFP08582 738 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 ACAA1P09110 424 aaPredicted RBP13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 GLRA1P23415 457 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 BDKRB2P30411 391 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 ERVK11-1P61568 191 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 RELBQ01201 579 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 KISS1Q15726 138 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 NEDD8Q15843 81 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 MICBQ29980 383 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 SMIM21Q3B7S5 101 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DDI2Q5TDH0 399 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4L9Q6RFH8 374 aaPredicted RBP13.69□□□□□ -0.22
NEK9-211ENST00000557673 TMEM91Q6ZNR0 172 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 PNLDC1Q8NA58 520 aaKnown RBP13.69□□□□□ -0.22
NEK9-211ENST00000557673 OR52N4Q8NGI2 321 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 OR5D18Q8NGL1 313 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 MUL1Q969V5 352 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 SLAMF9Q96A28 289 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 CEP19Q96LK0 163 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 NR1H4Q96RI1 486 aaPredicted RBP13.69□□□□□ -0.22
NEK9-211ENST00000557673 DNAJB11Q9UBS4 358 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 FOXJ3Q9UPW0 622 aa13.69□□□□□ -0.22
NEK9-211ENST00000557673 CMYA5Q8N3K9 4069 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 A0A087WXM4 84 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 CCRL2O00421 344 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 GABRPO00591 440 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 MAGEB3O15480 346 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 NDUFA2O43678 99 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 ALDOBP05062 364 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 UCHL1P09936 223 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms