RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SPAG17Q6Q759 2223 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 ADAMTS20P59510 1910 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 TRBV23-1A0A0A0MS06 115 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 GPR37O15354 613 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 DHHO43323 396 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 EN2P19622 333 aaPredicted RBP10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 SNAI3Q3KNW1 292 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 SLC35G3Q8N808 338 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 OR11L1Q8NGX0 322 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF581Q9P0T4 197 aa10.27□□□□□ -0.77
VIPAS39-211ENST00000557658 CDS2O95674 445 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 GLB1P16278 677 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 S100A2P29034 98 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 CDX1P47902 265 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 ASCL1P50553 236 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 SRPXP78539 464 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 MEX3BQ6ZN04 569 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 CPEB2Q7Z5Q1 589 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 C20orf196Q8IYI0 205 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 FADS6Q8N9I5 356 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 DYRK2Q92630 601 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 SLAMF9Q96A28 289 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 BORCS8Q96FH0 119 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 PAPOLGQ9BWT3 736 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 BCO1Q9HAY6 547 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 FAM221AA4D161 298 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 FAM24AA6NFZ4 105 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 NPIPA2E9PIF3 369 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 NPIPA3F8WFD2 350 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 H3BQ15 152 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 HSPA12AO43301 675 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 PITX3O75364 302 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 YIF1AO95070 293 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 RBP2P50120 134 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 CCL20P78556 96 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 RSPO4Q2I0M5 234 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 OR2B11Q5JQS5 317 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 WDR74Q6RFH5 385 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 LHFPL2Q6ZUX7 228 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 FBXL14Q8N1E6 418 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 ZFP62Q8NB50 900 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 OR10AD1Q8NGE0 317 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 RAB39BQ96DA2 213 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 SPACA9Q96E40 222 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 KIAA1456Q9P272 454 aa10.26□□□□□ -0.77
VIPAS39-211ENST00000557658 IGKV1-27A0A075B6S5 117 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 A0A087WWC5 75 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF729A6NN14 1252 aaPredicted RBP10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 GEMIN2O14893 280 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 MYF5P13349 255 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 PNLIPP16233 465 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 TAGLN2P37802 199 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 NKX2-1P43699 371 aaPredicted RBP10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 UBE2KP61086 200 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 H3F3AP84243 136 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 ASCL4Q6XD76 172 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 OSR2Q8N2R0 312 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 OR2AE1Q8NHA4 323 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF385AQ96PM9 386 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 SPIN2AQ99865 258 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 SPIN2BQ9BPZ2 258 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 SLC25A31Q9H0C2 315 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF700Q9H0M5 742 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 MMP24Q9Y5R2 645 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 SHANK1Q9Y566 2161 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 C3orf85A0A1B0GTC6 90 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 VAMP5O95183 116 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 AADACP22760 399 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 NDUFA6P56556 154 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 RND3P61587 244 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF674Q2M3X9 581 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 PIGYQ3MUY2 71 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 SPSB3Q6PJ21 355 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 BRICD5Q6PL45 260 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 TP53RKQ96S44 253 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 RASL10BQ96S79 203 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 DEFB126Q9BYW3 111 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 CHRDQ9H2X0 955 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 C11orf1Q9H5F2 150 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 PLEKHF2Q9H8W4 249 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 EML6Q6ZMW3 1958 aa10.25□□□□□ -0.77
VIPAS39-211ENST00000557658 IGSF23A1L1A6 192 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 NKX2-6A6NCS4 301 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 CDRT15L2A8MXV6 281 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 C2CD4DB7Z1M9 353 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 TRDCB7Z8K6 153 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 TP53I11O14683 189 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 MPPED1O15442 326 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 OR8B8Q15620 311 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 PRAMEF20Q5VT98 475 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 FAM185AQ8N0U4 392 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM123Q8N131 208 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF610Q8N9Z0 462 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 INTS12Q96CB8 462 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ULBP2Q9BZM5 246 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms