RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 OR51B5Q9H339 312 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 ASB7Q9H672 318 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 NANOGQ9H9S0 305 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 RDH14Q9HBH5 336 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 RRAGDQ9NQL2 400 aaPredicted RBP2.18□□□□□ -2.06
TRAV28-201ENST00000557548 XPNPEP1Q9NQW7 623 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 FBXO6Q9NRD1 293 aaPredicted RBP2.18□□□□□ -2.06
TRAV28-201ENST00000557548 FAM49BQ9NUQ9 324 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 DDX19AQ9NUU7 478 aaKnown RBP2.18□□□□□ -2.06
TRAV28-201ENST00000557548 ERGIC3Q9Y282 383 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 ACOT9Q9Y305 439 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 SNX24Q9Y343 169 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 ABCC11Q96J66 1382 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 WDR7Q9Y4E6 1490 aa2.18□□□□□ -2.06
TRAV28-201ENST00000557548 MAGI3Q5TCQ9 1506 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ZMYM4Q5VZL5 1548 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PREX2Q70Z35 1606 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 SETD1AO15047 1707 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 IGHV1-69DA0A0B4J2H0 117 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 IGKV1-8A0A0C4DH67 115 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 A0A0J9YXV3 536 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 A0A1B0GX12 115 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 A6NDX4 124 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 EFCAB10A6NFE3 127 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 EFCAB9A8MZ26 197 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 C21orf140B9A014 251 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 J3QLI3 93 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 KCNK1O00180 336 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CCRL2O00421 344 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 KPNA3O00505 521 aaPredicted RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 LAD1O00515 517 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CXCR6O00574 342 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 BIRC5O15392 142 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 FGF16O43320 207 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 FADS1O60427 444 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 MPZL2O60487 215 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 STX10O60499 249 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CA11O75493 328 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 GATBO75879 557 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 DCTN3O75935 186 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 TTC4O95801 387 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 RLN2P04090 185 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 HLA-DPB1P04440 258 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 LIMS3P0CW19 117 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 LIMS4P0CW20 117 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 SLC2A1P11166 492 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 UGT2B7P16662 529 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 OMGP23515 440 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CRABP2P29373 138 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CD70P32970 193 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 UBE2AP49459 152 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF136P52737 540 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 STC1P52823 247 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 SYNJ2BPP57105 145 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 RAB8AP61006 207 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PSME3P61289 254 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 SLC35A1P78382 337 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 FAM3AP98173 230 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 TNFRSF9Q07011 255 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PSG7Q13046 419 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 KRR1Q13601 381 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 POU6F1Q14863 301 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 RBMY1FQ15415 496 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 MAPK14Q16539 360 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF658BQ4V348 819 aaPredicted RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 SPIN4Q56A73 249 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 FAM27D1Q5T7N8 215 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 MED27Q6P2C8 311 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 Q6ZT83 130 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 C6orf120Q7Z4R8 191 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 LYG2Q86SG7 212 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PRSS58Q8IYP2 241 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CA13Q8N1Q1 262 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 STK40Q8N2I9 435 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 Q8N9W7 124 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 OR11L1Q8NGX0 322 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 OR10Z1Q8NGY1 313 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 TESCQ96BS2 214 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 HAUS1Q96CS2 278 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 RMND5BQ96G75 393 aaPredicted RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 SLC35E1Q96K37 410 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CEP170P1Q96L14 293 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 FAM19A4Q96LR4 140 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 NRTNQ99748 197 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 C20orf144Q9BQM9 153 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PYGO2Q9BRQ0 406 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 NUDT9Q9BW91 350 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 NXF2Q9GZY0 626 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PARP12Q9H0J9 701 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 TLNRD1Q9H1K6 362 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 LINC00597Q9H2U6 94 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 RHOFQ9HBH0 211 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM27Q9HBJ8 222 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CMTM6Q9NX76 183 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 RAB26Q9ULW5 256 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PSG11Q9UQ72 335 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 GINS2Q9Y248 185 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 FARSAQ9Y285 508 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 NUP155O75694 1391 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms