RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TGFBR2P37173 567 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 BMXP51813 675 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 ZP1P60852 638 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 DOC2BQ14184 412 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 C9orf139Q6ZV77 190 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 PRSS48Q7RTY5 328 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 PXT1Q8NFP0 134 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 OR52N4Q8NGI2 321 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 OR51A2Q8NGJ7 313 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 OR5D18Q8NGL1 313 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 OR13C5Q8NGS8 318 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 TMEM158Q8WZ71 300 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 SGCDQ92629 289 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 SNX22Q96L94 193 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 JMJD8Q96S16 334 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 CCDC90BQ9GZT6 254 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 ISYNA1Q9NPH2 558 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 RBFOX1Q9NWB1 397 aaKnown RBP8.81□□□□□ -1
LINC00239-201ENST00000556973 ONECUT1Q9UBC0 465 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 ZNF69Q9UC07 566 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 BLOC1S6Q9UL45 172 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 FOXJ3Q9UPW0 622 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 TRBV5-7A0A0A0MS05 114 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 CENPVL3A0A0U1RRI6 287 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 A0A1W2PQ09 198 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 M0R1W7 72 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 GABRPO00591 440 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 ZNF737O75373 536 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 HAND1O96004 215 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 SFTPBP07988 381 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 EEF1B2P24534 225 aaKnown RBP8.8□□□□□ -1
LINC00239-201ENST00000556973 LMO1P25800 156 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 MAPK3P27361 379 aaPredicted RBP8.8□□□□□ -1
LINC00239-201ENST00000556973 ZNF93P35789 620 aaPredicted RBP8.8□□□□□ -1
LINC00239-201ENST00000556973 RPL31P62899 125 aaKnown RBP8.8□□□□□ -1
LINC00239-201ENST00000556973 BLMHQ13867 455 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 TUSC1Q2TAM9 212 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 ELP2Q6IA86 826 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 ASCL4Q6XD76 172 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 RBMS3Q6XE24 437 aaKnown RBP8.8□□□□□ -1
LINC00239-201ENST00000556973 VMO1Q7Z5L0 202 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 CDH26Q8IXH8 852 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 C22orf15Q8WYQ4 148 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 LHX4Q969G2 390 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 OR14A2Q96R54 314 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 TBX15Q96SF7 602 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 SLC6A7Q99884 636 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 ELL3Q9HB65 397 aaPredicted RBP8.8□□□□□ -1
LINC00239-201ENST00000556973 GSTK1Q9Y2Q3 226 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 WNK2Q9Y3S1 2297 aa8.8□□□□□ -1
LINC00239-201ENST00000556973 IGHV3OR16-10A0A075B7F0 116 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 TRAV40A0A0B4J280 105 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 A0A1W2PPK0 400 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 MRPS14O60783 128 aaKnown RBP8.79□□□□□ -1
LINC00239-201ENST00000556973 VENTXO95231 258 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 CALCBP10092 127 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 FSTP19883 344 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 DUSP1P28562 367 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 PTGFRP43088 359 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 MTNR1BP49286 362 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 HILS1P60008 231 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 MEF2CQ06413 473 aaPredicted RBP8.79□□□□□ -1
LINC00239-201ENST00000556973 TPBGQ13641 420 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 TRAM1Q15629 374 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 ACSM3Q53FZ2 586 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 DDI2Q5TDH0 399 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 TMEM200BQ69YZ2 307 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 METAP1DQ6UB28 335 aaPredicted RBP8.79□□□□□ -1
LINC00239-201ENST00000556973 UNQ9370/PRO34162Q6UXP9 181 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 C17orf107Q6ZR85 190 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 GDPD3Q7L5L3 318 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 FAM185AQ8N0U4 392 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 BCL6BQ8N143 479 aaPredicted RBP8.79□□□□□ -1
LINC00239-201ENST00000556973 OR8H2Q8N162 312 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 Q8N7P7 452 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 ASCC1Q8N9N2 400 aaKnown RBP8.79□□□□□ -1
LINC00239-201ENST00000556973 Q8NFD4 153 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 OR4M1Q8NGD0 313 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 PPP1R35Q8TAP8 253 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 TNFAIP8L1Q8WVP5 186 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 UFD1Q92890 307 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 ORAI1Q96D31 301 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 DERL3Q96Q80 235 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 S100A13Q99584 98 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 MDFIQ99750 246 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 YTHDF1Q9BYJ9 559 aaKnown RBP8.79□□□□□ -1
LINC00239-201ENST00000556973 METTL9Q9H1A3 318 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 EXOSC4Q9NPD3 245 aaKnown RBP8.79□□□□□ -1
LINC00239-201ENST00000556973 PCDHB16Q9NRJ7 776 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 C19orf12Q9NSK7 152 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 IL36RNQ9UBH0 155 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 ING4Q9UNL4 249 aa8.79□□□□□ -1
LINC00239-201ENST00000556973 TRAV8-7A0A075B6U6 113 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 IGHV1-69DA0A0B4J2H0 117 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 A0A0G2JK05 382 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 hCG_1809904A0A1W2PP81 198 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 A0A1W2PPE2 198 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 A0A1W2PR64 198 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 A0A1W2PRV1 198 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 TMEM82A0PJX8 343 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms