RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 GATBO75879 557 aaKnown RBP14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 MMP23AO75900 390 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 GABRR1P24046 479 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 HTR1DP28221 377 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 PEX2P28328 305 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 FUT6P51993 359 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 EFNB1P98172 346 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 ZNF91Q05481 1191 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 IL18R1Q13478 541 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 FLOT2Q14254 428 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 VAX1Q5SQQ9 334 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 ZBTB49Q6ZSB9 765 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 CCDC121Q6ZUS5 278 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 C16orf82Q7Z2V1 217 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 CATSPERDQ86XM0 798 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 EGFL6Q8IUX8 553 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 YIPF7Q8N8F6 280 aa14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 SEBOXQ9HB31 216 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-209ENST00000556909 TCRBV3S1A0A5B6 114 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 PSPNO60542 156 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 PF4P02776 101 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 KRT8P05787 483 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 CD24P25063 80 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 SLC35A2P78381 396 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 SLX4IPQ5VYV7 408 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 CENPVQ7Z7K6 275 aaPredicted RBP14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 TMEM163Q8TC26 289 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 MYDGFQ969H8 173 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 BORCS8Q96FH0 119 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 TBX5Q99593 518 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 LIN7BQ9HAP6 207 aa14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 RBFOX1Q9NWB1 397 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 H2AFY2Q9P0M6 372 aaPredicted RBP14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 TSSC4Q9Y5U2 329 aaPredicted RBP14.62□□□□□ -0.07
VIPAS39-209ENST00000556909 TCRBV4S1A1TA0A5B7 111 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 H3BUI4 141 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 MITFO75030 526 aaPredicted RBP14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 DUSP1P28562 367 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 EPHA2P29317 976 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 OR3A1P47881 315 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 NPBWR2P48146 333 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 C12orf73Q69YU5 71 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 C11orf87Q6NUJ2 197 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 BAIAP2L2Q6UXY1 529 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 TRAPPC6BQ86SZ2 158 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 GID4Q8IVV7 300 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 Q8IYB0 196 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 ENTHD1Q8IYW4 607 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 CCDC197Q8NCU1 140 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 AKR1E2Q96JD6 320 aa14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 UBE2J1Q9Y385 318 aaPredicted RBP14.61□□□□□ -0.07
VIPAS39-209ENST00000556909 RYR3Q15413 4870 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 TRBV2A0A0J9YWF9 115 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 ZAR1LA6NP61 321 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 MGST3O14880 152 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 LPLP06858 475 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 BCL3P20749 454 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 P2RX3P56373 397 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 KRTAP10-11P60412 298 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 ZNF146Q15072 292 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 ABCA11PQ4W5N1 156 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 PRAMEF5Q5TYX0 476 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 OR4X2Q8NGF9 303 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 CAPSLQ8WWF8 208 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 RCC1LQ96I51 464 aaKnown RBP14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 IL4I1Q96RQ9 567 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 SLC25A33Q9BSK2 321 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 KRT84Q9NSB2 600 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 DPM3Q9P2X0 92 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 TENM3Q9P273 2699 aa14.6□□□□□ -0.07
VIPAS39-209ENST00000556909 LOC107986453A0A1B0GWG9 222 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 A0A1W2PQL4 384 aaPredicted RBP14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 WI2-2373I1.2A0A1W2PRP0 233 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 ENTPD6O75354 484 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 CALCBP10092 127 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 ERP29P30040 261 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 BRS3P32247 399 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 POU3F4P49335 361 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 SNU13P55769 128 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 BDH1Q02338 343 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 C10orf99Q6UWK7 81 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 FAM58AQ8N1B3 248 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 ABHD12Q8N2K0 398 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 PRSS35Q8N3Z0 413 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 CCDC54Q8NEL0 328 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 UTP4Q969X6 686 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 ADI1Q9BV57 179 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 INPP5EQ9NRR6 644 aa14.59□□□□□ -0.07
VIPAS39-209ENST00000556909 FAM172BPA6NC97 362 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 METTL15A6NJ78 407 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 SH2D7A6NKC9 451 aaPredicted RBP14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 SIRPB1O00241 398 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 OR2F2O95006 317 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 APOL3O95236 402 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 DUS4LO95620 317 aaKnown RBP14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 FAM107AO95990 144 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 SERPINA3P01011 423 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 IGLV1-47P01700 117 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 AMY1AP04745 511 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms