RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 A6NDX4 124 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 CIB2O75838 187 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 CALCBP10092 127 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 ATF1P18846 271 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 BCL3P20749 454 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 POU3F4P49335 361 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 OR12D2P58182 307 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 TCF23Q7RTU1 214 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 TMEM219Q86XT9 240 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 FAM58AQ8N1B3 248 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 FGGYQ96C11 551 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 ZNF702PQ9H963 129 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 RBFOX1Q9NWB1 397 aaKnown RBP18.24■□□□□ 0.51
ACTN1-220ENST00000556433 IMPAD1Q9NX62 359 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 PITPNC1Q9UKF7 332 aa18.24■□□□□ 0.51
ACTN1-220ENST00000556433 IGKV1-9A0A0C4DH69 117 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 ENTPD6O75354 484 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 PRKACBP22694 351 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 ACTA2P62736 377 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 ACTG2P63267 376 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 ACTC1P68032 377 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 ACTA1P68133 377 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 ZNF91Q05481 1191 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 HABP2Q14520 560 aaPredicted RBP18.23■□□□□ 0.51
ACTN1-220ENST00000556433 KCTD20Q7Z5Y7 419 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 ZNF676Q8N7Q3 588 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 FRRS1LQ9P0K9 344 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 HILPDAQ9Y5L2 63 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 LINC00312Q9Y6C7 94 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 SESN1Q9Y6P5 492 aa18.23■□□□□ 0.51
ACTN1-220ENST00000556433 A0A0G2JK05 382 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 DAPL1A0PJW8 107 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 PSPNO60542 156 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 OPN1MWP04001 364 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 OPN1MW2P0DN77 364 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 OPN1MW3P0DN78 364 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 ZNF20P17024 532 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 PRKACAP17612 351 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 AZGP1P25311 298 aaKnown RBP18.22■□□□□ 0.51
ACTN1-220ENST00000556433 SNU13P55769 128 aaKnown RBP18.22■□□□□ 0.51
ACTN1-220ENST00000556433 UTS2BQ765I0 119 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 OR4S1Q8NGB4 309 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 RNFT2Q96EX2 444 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 SERTAD4Q9NUC0 356 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 GLS2Q9UI32 602 aa18.22■□□□□ 0.51
ACTN1-220ENST00000556433 PRKDCP78527 4128 aaKnown RBP18.22■□□□□ 0.51
ACTN1-220ENST00000556433 TRBV2A0A0J9YWF9 115 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 MGST3O14880 152 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 ZNF146Q15072 292 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 MINOS1Q5TGZ0 78 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 LHFPL2Q6ZUX7 228 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 LYG1Q8N1E2 194 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 Q8N2B8 174 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 PYDC1Q8WXC3 89 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 PRSS22Q9GZN4 317 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 ORC6Q9Y5N6 252 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 MINOS1-NBL1R4GNA1 71 aa18.21■□□□□ 0.51
ACTN1-220ENST00000556433 G3V4G9 280 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 SLC16A6O15403 523 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 ISG15P05161 165 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 HTR1AP08908 422 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 OCM2P0CE71 109 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 OCMP0CE72 109 aaPredicted RBP18.2■□□□□ 0.5
ACTN1-220ENST00000556433 JUNBP17275 347 aaPredicted RBP18.2■□□□□ 0.5
ACTN1-220ENST00000556433 DYNLT3P51808 116 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 NANOS3P60323 173 aaKnown RBP18.2■□□□□ 0.5
ACTN1-220ENST00000556433 SLC34A1Q06495 639 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 PDZK1IP1Q13113 114 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 SPIN3Q5JUX0 258 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 FDX2Q6P4F2 183 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 TRAPPC6BQ86SZ2 158 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 NDNFQ8TB73 568 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 SPSB1Q96BD6 273 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 HRASLS5Q96KN8 279 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 OPALINQ96PE5 141 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 MBOAT4Q96T53 435 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 TMEM133Q9H2Q1 129 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 GSTK1Q9Y2Q3 226 aa18.2■□□□□ 0.5
ACTN1-220ENST00000556433 DSCAML1Q8TD84 2053 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 IGHV2-26A0A0B4J1V2 119 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 J3QRE1 110 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 SIRPB1O00241 398 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 F2RL2O00254 374 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 SH2D1BO14796 132 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 FBXO24O75426 580 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 ALPLP05186 524 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 CD28P10747 220 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 OR3A1P47881 315 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 SNRPGP62308 76 aaKnown RBP18.19■□□□□ 0.5
ACTN1-220ENST00000556433 NSUN5P1Q3KNT7 163 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 ZIK1Q3SY52 487 aaPredicted RBP18.19■□□□□ 0.5
ACTN1-220ENST00000556433 SLC25A30Q5SVS4 291 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 MEDAGQ5VYS4 303 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 RFT1Q96AA3 541 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 CLEC7AQ9BXN2 247 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 HMG20AQ9NP66 347 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 HHLA2Q9UM44 414 aa18.19■□□□□ 0.5
ACTN1-220ENST00000556433 UBE2J1Q9Y385 318 aaPredicted RBP18.19■□□□□ 0.5
ACTN1-220ENST00000556433 J3QLW9 94 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 PEX14O75381 377 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms