RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PATE4P0C8F1 98 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 GLULP15104 373 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 CCDC74BQ96LY2 380 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 AQP10Q96PS8 301 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 A0A1B0GTQ1 180 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 P2RY4P51582 365 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 DYNLT3P51808 116 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZNF519Q8TB69 540 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 SP7Q8TDD2 431 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 LANCL2Q9NS86 450 aa13.23□□□□□ -0.29
ARHGEF40-207ENST00000556399 GEMIN2O14893 280 aaKnown RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 OR8U8P0C7N1 319 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 COX5AP20674 150 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 FOXK1P85037 733 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 EWSR1Q01844 656 aaKnown RBP eCLIP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 ARSJQ5FYB0 599 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 COL13A1Q5TAT6 717 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 LINC00114Q6XXX2 140 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 LINC00696Q6ZRV3 163 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 GFI1Q99684 422 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 C5orf66Q9H5L9 145 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 G6PC2Q9NQR9 355 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 FAM166BA8MTA8 275 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 FAM3AP98173 230 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZP4Q12836 540 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 SCARF2Q96GP6 870 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 RAB9BQ9NP90 201 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 MBP02144 154 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 GAPDHP04406 335 aaKnown RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 DLK1P80370 383 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZNF66Q6ZN08 573 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 SLC22A18ASQ8N1D0 253 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 EIF4E3Q8N5X7 224 aaKnown RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 H3BQ15 152 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 MPPED1O15442 326 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 TSPAN2O60636 221 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 FGF7P21781 194 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 OR2I1PQ8NGU4 316 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 ADGRG7Q96K78 797 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 MYOZ1Q9NP98 299 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZNF391Q9UJN7 358 aa13.22□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 HKR1P10072 659 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 DHRS7BQ6IAN0 325 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZNF574Q6ZN55 896 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 ERGIC1Q969X5 290 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 PINX1Q96BK5 328 aaKnown RBP13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 RAB40CQ96S21 281 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 SLX1AQ9BQ83 275 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 B3GAT1Q9P2W7 334 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 STARD10Q9Y365 291 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 DEDDO75618 318 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 TBC1D28Q2M2D7 210 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 OR2V1Q8NHB1 315 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 CLDN23Q96B33 292 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 GDF15Q99988 308 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 CHST5Q9GZS9 411 aa13.21□□□□□ -0.29
ARHGEF40-207ENST00000556399 PRR32B1ATL7 298 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 TIMM8AO60220 97 aaPredicted RBP13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 IRF2P14316 349 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 ADAMTS17Q8TE56 1095 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 DYRK2Q92630 601 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 KCNK17Q96T54 332 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZNF576Q9H609 170 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 ERRFI1Q9UJM3 462 aaPredicted RBP13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 POLDIP2Q9Y2S7 368 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 RNF222A6NCQ9 220 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 TERTO14746 1132 aaKnown RBP13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 ID4P47928 161 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 TMEM37Q8WXS4 190 aa13.21□□□□□ -0.3
ARHGEF40-207ENST00000556399 PLXNA3P51805 1871 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 C17orf51A8MQB3 221 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 EIF3GO75821 320 aaKnown RBP eCLIP13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 C1QL1O75973 258 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 FOXL2P58012 376 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 NHLH2Q02577 135 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 EDDM3AQ14507 147 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 C17orf78Q8N4C9 275 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 MSI2Q96DH6 328 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 IGHV1OR15-9A0A0B4J2B8 117 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 MAP1LC3B2A6NCE7 125 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 MASP2O00187 686 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 SH2D1BO14796 132 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 CER1O95813 267 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 MLF1P58340 268 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 CCL7P80098 99 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 RHBDD2Q6NTF9 364 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 IFI44Q8TCB0 444 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 FAM206AQ9NX38 181 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 NKX2-6A6NCS4 301 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 SPINT2O43291 252 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms