RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 Q8NFD4 153 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 OR52N4Q8NGI2 321 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 C8orf46Q8TAG6 207 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 RFT1Q96AA3 541 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 UPRTQ96BW1 309 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 ORAI1Q96D31 301 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 DMRTB1Q96MA1 342 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 DERL3Q96Q80 235 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 YTHDF1Q9BYJ9 559 aaKnown RBP7.97□□□□□ -1.13
SRP54-210ENST00000556380 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
SRP54-210ENST00000556380 RBFOX1Q9NWB1 397 aaKnown RBP7.97□□□□□ -1.13
SRP54-210ENST00000556380 IL36RNQ9UBH0 155 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 RPUSD1Q9UJJ7 312 aaKnown RBP7.97□□□□□ -1.13
SRP54-210ENST00000556380 AUP1Q9Y679 476 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 A0A1W2PPK0 400 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 MAGEA13PA6NCF6 341 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 NKX6-3A6NJ46 265 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 F8W735 103 aaPredicted RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 ENSAO43768 121 aaKnown RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 MRPS14O60783 128 aaKnown RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 ZNF737O75373 536 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 SC5DO75845 299 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 SFTPBP07988 381 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 MMP9P14780 707 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 FSTP19883 344 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 SRP14P37108 136 aaKnown RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 GABRA2P47869 451 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 POU3F4P49335 361 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 CEBPDP49716 269 aaPredicted RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 GABARAPL2P60520 117 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 INSL4Q14641 139 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 ZNF146Q15072 292 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 LRRC10Q5BKY1 277 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 BTNL3Q6UXE8 466 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 Q8IYB0 196 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 FAM58AQ8N1B3 248 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 MS4A15Q8N5U1 240 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 TEX29Q8N6K0 151 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 PXT1Q8NFP0 134 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 OR5D18Q8NGL1 313 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 NANPQ8TBE9 248 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 ST8SIA4Q92187 359 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 THRSPQ92748 146 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 OR14A2Q96R54 314 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 DCTN5Q9BTE1 182 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 CCDC90BQ9GZT6 254 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 PPIL3Q9H2H8 161 aaKnown RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 CNTD2Q9H8S5 307 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 NEK6Q9HC98 313 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 HMG20AQ9NP66 347 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 TMEM138Q9NPI0 162 aa7.96□□□□□ -1.14
SRP54-210ENST00000556380 SLC25A10Q9UBX3 287 aaPredicted RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 SF3B6Q9Y3B4 125 aaKnown RBP7.96□□□□□ -1.14
SRP54-210ENST00000556380 TMEM82A0PJX8 343 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 K7N7A8 449 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 GABRPO00591 440 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 INMTO95050 263 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 CHRM2P08172 466 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 HCKP08631 526 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 CD37P11049 281 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 CPEP16870 476 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 BDKRB2P30411 391 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 TGFBR2P37173 567 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 FGF12P61328 243 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 COL10A1Q03692 680 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 EMX1Q04741 257 aaPredicted RBP7.95□□□□□ -1.14
SRP54-210ENST00000556380 MLLT11Q13015 90 aaPredicted RBP7.95□□□□□ -1.14
SRP54-210ENST00000556380 MED22Q15528 200 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 TBCEQ15813 527 aaPredicted RBP7.95□□□□□ -1.14
SRP54-210ENST00000556380 ACSM3Q53FZ2 586 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 ELP2Q6IA86 826 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 TMEM91Q6ZNR0 172 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 SPARTQ8N0X7 666 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 ZNF561Q8N587 486 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 PNLDC1Q8NA58 520 aaKnown RBP7.95□□□□□ -1.14
SRP54-210ENST00000556380 EMG1Q92979 244 aaKnown RBP7.95□□□□□ -1.14
SRP54-210ENST00000556380 TBX15Q96SF7 602 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 MGLLQ99685 303 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 MRI1Q9BV20 369 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 FAM234AQ9H0X4 552 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 SIRPDQ9H106 197 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 RHOFQ9HBH0 211 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 NOX4Q9NPH5 578 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 ACOT13Q9NPJ3 140 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 FOXJ3Q9UPW0 622 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 LRRC42Q9Y546 428 aa7.95□□□□□ -1.14
SRP54-210ENST00000556380 TRBV23-1A0A0A0MS06 115 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 HAND1O96004 215 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 CYB5AP00167 134 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 TK1P04183 234 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 OCMP0CE72 109 aaPredicted RBP7.94□□□□□ -1.14
SRP54-210ENST00000556380 IGHV4-38-2P0DP08 117 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 TMEM225BP0DP42 221 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 CALCBP10092 127 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 EEF1B2P24534 225 aaKnown RBP7.94□□□□□ -1.14
SRP54-210ENST00000556380 LMO1P25800 156 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 DUSP1P28562 367 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 PTGFRP43088 359 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 ARF6P62330 175 aa7.94□□□□□ -1.14
SRP54-210ENST00000556380 PPP3R1P63098 170 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms