RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SCGB1D2O95969 90 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 IFNA2P01563 188 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TTRP02766 147 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SERPINA5P05154 406 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 S100A9P06702 114 aaKnown RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SFTPBP07988 381 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CYC1P08574 325 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF735P0CB33 412 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 GNB3P16520 340 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF43P17038 809 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 PRKACAP17612 351 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 EIF1P41567 113 aaKnown RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 GLP1RP43220 463 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CSNK1A1P48729 337 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 NPY4RP50391 375 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 OR1D5P58170 312 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF121P58317 390 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 RAB5BP61020 215 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SLC35A1P78382 337 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CNN3Q15417 329 aaKnown RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 PCK2Q16822 640 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 HYAL4Q2M3T9 481 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 MOGAT2Q3SYC2 334 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ABCA11PQ4W5N1 156 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 FAM76BQ5HYJ3 339 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 PDSS1Q5T2R2 415 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 LYSMD4Q5XG99 296 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 OTPQ5XKR4 325 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CARD17Q5XLA6 110 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 H3F3CQ6NXT2 135 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CORO6Q6QEF8 472 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 LANCL3Q6ZV70 420 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 FAM57BQ71RH2 274 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 GALNTL5Q7Z4T8 443 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 HOGA1Q86XE5 327 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SGPP2Q8IWX5 399 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ESX1Q8N693 406 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF441Q8N8Z8 693 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CCDC71LQ8N9Z2 235 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SLC30A7Q8NEW0 376 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CADM4Q8NFZ8 388 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 OR1S2Q8NGQ3 325 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 OR10Z1Q8NGY1 313 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 OR1L3Q8NH93 324 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TERB2Q8NHR7 220 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 OR51E1Q8TCB6 317 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 PP6455Q8WZ26 134 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 EMG1Q92979 244 aaKnown RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SPTSSAQ969W0 71 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ADAT3Q96EY9 351 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SAT2Q96F10 170 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 C2orf50Q96LR7 162 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 AQP10Q96PS8 301 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 NKX3-1Q99801 234 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 MICU1Q9BPX6 476 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 NUDT22Q9BRQ3 303 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 NAA11Q9BSU3 229 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 OR2S2Q9NQN1 319 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 G6PC2Q9NQR9 355 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SLC22A11Q9NSA0 550 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 FGF21Q9NSA1 209 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 MED29Q9NX70 200 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF230Q9UIE0 474 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 DKKL1Q9UK85 242 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 HDGFL3Q9Y3E1 203 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM184BQ9Y519 407 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 PCDHGA1Q9Y5H4 931 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 CLDN16Q9Y5I7 305 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 KPTNQ9Y664 436 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 POMT1Q9Y6A1 747 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 F8P00451 2351 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TLN1Q9Y490 2541 aaKnown RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ITPR2Q14571 2701 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PIGBOS1A0A0B4J2F0 54 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 A0A1W2PR77 199 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF785A8K8V0 405 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 FTCDNL1E5RQL4 147 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 F8VVB4 439 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 F8VWA3 439 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 K7EPK0 472 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 RAB27BO00194 218 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 MFNGO00587 321 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 TOX3O15405 576 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 LMX1BO60663 402 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF354AO60765 605 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 CA11O75493 328 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SCRG1O75711 98 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 DHRS3O75911 302 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PIAS2O75928 621 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 CSTBP04080 98 aaKnown RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 IFNA4P05014 189 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 HPNP05981 417 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 S100A6P06703 90 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 HLA-DOBP13765 273 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 IL11P20809 199 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SERPINA2P20848 420 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 MSR1P21757 451 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms