RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TRAPPC6AO75865 159 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 CDRT1O95170 752 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 SMC2O95347 1197 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 P01737 135 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 PRKACBP22694 351 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 PRSS3P35030 304 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 HCCSP53701 268 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 MTPNP58546 118 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 CST9Q5W186 159 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZNF101Q8IZC7 436 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 SLC35G3Q8N808 338 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 ST20-AS1Q8NBB2 130 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 APCDD1LQ8NCL9 501 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 OR13C9Q8NGT0 318 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 CPNE4Q96A23 557 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 CIDECQ96AQ7 238 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 Q96MT0 163 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 TSNAXQ99598 290 aaKnown RBP3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 NAPGQ99747 312 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 ING2Q9H160 280 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 PLEKHF2Q9H8W4 249 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 CFL2Q9Y281 166 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 BZW2Q9Y6E2 419 aaKnown RBP3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 ERICH2A1L162 156 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ISPDA4D126 451 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 POLR1CO15160 346 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 CCDC22O60826 627 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 PTTG1O95997 202 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 IGLV2-8P01709 118 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ADORA1P30542 326 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 CARD18P57730 90 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 PPP1CAP62136 330 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ALX1Q15699 326 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 KDM4DQ6B0I6 523 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ASCL4Q6XD76 172 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 FAM58AQ8N1B3 248 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR2Z1Q8NG97 314 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR4A15Q8NGL6 344 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ZFAND1Q8TCF1 268 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 RNF170Q96K19 258 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 IP6K3Q96PC2 410 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 GABRG3Q99928 467 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 SCRT1Q9BWW7 348 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ULBP2Q9BZM5 246 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 TM6SF2Q9BZW4 377 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 STMN4Q9H169 189 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 CSNK1G1Q9HCP0 422 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 VAX2Q9UIW0 290 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 FER1L6Q2WGJ9 1857 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 UNC80Q8N2C7 3258 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 SETXQ7Z333 2677 aaKnown RBP3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ANKRD12Q6UB98 2062 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 N4BP2Q86UW6 1770 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 ARFGEF2Q9Y6D5 1785 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 WDR90Q96KV7 1748 aa3.02□□□□□ -1.93
CKS1BP1-201ENST00000555221 TTC28Q96AY4 2481 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 RAD50Q92878 1312 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 ZNF532Q9HCE3 1301 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 CCL15-CCL14A0A0B4J2E2 113 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 GSTTP1A0A1W2PQM5 241 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 A8MUU9 505 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 GATCO43716 136 aaKnown RBP3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 CSTAP01040 98 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 MMP7P09237 267 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 ZNF14P17017 642 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 PTNP21246 168 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 TAS2R43P59537 309 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 FUT5Q11128 374 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 CCL15Q16663 113 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 DUPD1Q68J44 220 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 C16orf87Q6PH81 154 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 LYPD1Q8N2G4 141 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 SLC25A29Q8N8R3 303 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR5M1Q8NGP8 315 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 S100PBPQ96BU1 408 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 CENPNQ96H22 339 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 TMEM100Q9NV29 134 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 MARCOQ9UEW3 520 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 SCN1AP35498 2009 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 DICER1Q9UPY3 1922 aaKnown RBP3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 MAST4O15021 2626 aa3.01□□□□□ -1.93
CKS1BP1-201ENST00000555221 RFX7Q2KHR2 1363 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 DLEC1Q9Y238 1755 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 MYH3P11055 1940 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 IGHV6-1A0A0B4J1U7 121 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 TRAV8-6A0A0B4J262 113 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 MAS1P04201 325 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 GNRHRP30968 328 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 ARR3P36575 388 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 NUP62P37198 522 aaPredicted RBP3□□□□□ -1.93
CKS1BP1-201ENST00000555221 MLF1P58340 268 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 KRTAP10-8P60410 259 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 SLC25A25Q6KCM7 469 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 PRSS54Q6PEW0 395 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 DEGS2Q6QHC5 323 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 ORMDL3Q8N138 153 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 CYB561A3Q8NBI2 242 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR51A7Q8NH64 312 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 OPTNQ96CV9 577 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 GPR82Q96P67 336 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms