RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 TMEM200BQ69YZ2 307 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 KCTD20Q7Z5Y7 419 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 CATSPERDQ86XM0 798 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 ANGPTL5Q86XS5 388 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 CALHM1Q8IU99 346 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 MKXQ8IYA7 352 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 ASCC1Q8N9N2 400 aaKnown RBP10.66□□□□□ -0.7
TUBB3-207ENST00000554927 OR4M1Q8NGD0 313 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 RPS4Y2Q8TD47 263 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
TUBB3-207ENST00000554927 C10orf35Q96D05 121 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 BORCS8Q96FH0 119 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 MRPL48Q96GC5 212 aaKnown RBP10.66□□□□□ -0.7
TUBB3-207ENST00000554927 GABARAPL3Q9BY60 117 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 GPR61Q9BZJ8 451 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 C19orf12Q9NSK7 152 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 GNG8Q9UK08 70 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 TCF19Q9Y242 345 aa10.66□□□□□ -0.7
TUBB3-207ENST00000554927 DNAH9Q9NYC9 4486 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 SAC3D1A6NKF1 404 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 APOL3O95236 402 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 TK1P04183 234 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 UBCP0CG48 685 aaKnown RBP10.65□□□□□ -0.7
TUBB3-207ENST00000554927 POLR2IP36954 125 aaKnown RBP10.65□□□□□ -0.7
TUBB3-207ENST00000554927 ATP1B3P54709 279 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 ACTC1P68032 377 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 ACTA1P68133 377 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 CD83Q01151 205 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 EGFEM1PQ0D2K5 195 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 TMEM244Q5VVB8 128 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 Q6ZSR3 168 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 GDPD3Q7L5L3 318 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 SSX6Q7RTT6 188 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 EGFL6Q8IUX8 553 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 PP6455Q8WZ26 134 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 EME1Q96AY2 570 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 CEP19Q96LK0 163 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 GLS2Q9UI32 602 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 PITPNC1Q9UKF7 332 aa10.65□□□□□ -0.7
TUBB3-207ENST00000554927 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
TUBB3-207ENST00000554927 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
TUBB3-207ENST00000554927 DAPL1A0PJW8 107 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 H3BSH0 61 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 H3BUI4 141 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 F2RL2O00254 374 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 ZNF20P17024 532 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 LMO1P25800 156 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 CEBPDP49716 269 aaPredicted RBP10.64□□□□□ -0.71
TUBB3-207ENST00000554927 EDDM3BP56851 147 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 MEDAGQ5VYS4 303 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 ZFP1Q6P2D0 407 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 LHFPL4Q7Z7J7 247 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 CENPVQ7Z7K6 275 aaPredicted RBP10.64□□□□□ -0.71
TUBB3-207ENST00000554927 Q8IYB0 196 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 ENTHD1Q8IYW4 607 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 BATF2Q8N1L9 274 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 OR13D1Q8NGV5 346 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 CHST5Q9GZS9 411 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 HES4Q9HCC6 221 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 INPP5EQ9NRR6 644 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 RYR2Q92736 4967 aa10.64□□□□□ -0.71
TUBB3-207ENST00000554927 TENM2Q9NT68 2774 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 LOC107986453A0A1B0GWG9 222 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 A6NDX4 124 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 VGLL3A8MV65 326 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 K7N7A8 449 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 INMTO95050 263 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 CCDC159P0C7I6 412 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 PIPP12273 146 aaPredicted RBP10.63□□□□□ -0.71
TUBB3-207ENST00000554927 PRKACBP22694 351 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 RBP2P50120 134 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 ERVK11-1P61568 191 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 BLCAPP62952 87 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 UBE2V2Q15819 145 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 TP53I3Q53FA7 332 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 Q6ZS46 218 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 SLC25A26Q70HW3 274 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 DNAAF1Q8NEP3 725 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 PYDC1Q8WXC3 89 aa10.63□□□□□ -0.71
TUBB3-207ENST00000554927 hADV38S2A0JD32 116 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
TUBB3-207ENST00000554927 HTR1AP08908 422 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 ZNF728P0DKX0 622 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 CCL3L1P16619 93 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 PEX2P28328 305 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 MTCP1P56278 107 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 MEF2CQ06413 473 aaPredicted RBP10.62□□□□□ -0.71
TUBB3-207ENST00000554927 UNQ9370/PRO34162Q6UXP9 181 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 EMG1Q92979 244 aaKnown RBP10.62□□□□□ -0.71
TUBB3-207ENST00000554927 MYDGFQ969H8 173 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 SLAMF9Q96A28 289 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 RNFT2Q96EX2 444 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 HRASLS5Q96KN8 279 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 SNX22Q96L94 193 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 MTCH1Q9NZJ7 389 aa10.62□□□□□ -0.71
TUBB3-207ENST00000554927 ENTPD6O75354 484 aa10.61□□□□□ -0.71
TUBB3-207ENST00000554927 RBP4P02753 201 aa10.61□□□□□ -0.71
TUBB3-207ENST00000554927 ARG1P05089 322 aa10.61□□□□□ -0.71
TUBB3-207ENST00000554927 ALPLP05186 524 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms