RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.71□□□□□ -0.22
SYNE3-203ENST00000554873 CHTOPQ9Y3Y2 248 aaKnown RBP13.71□□□□□ -0.22
SYNE3-203ENST00000554873 LRP4O75096 1905 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 PCNX3Q9H6A9 2034 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 NSG1A0A0A6YYJ2 146 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 SLC16A7O60669 478 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 FREM3P0C091 2139 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 AMY2BP19961 511 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 RAB7AP51149 207 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 EMP2P54851 167 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 ROM1Q03395 351 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 BATFQ16520 125 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 NUP54Q7Z3B4 507 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 TGIF2LYQ8IUE0 185 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 PRR22Q8IZ63 422 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 C8orf44Q96CB5 159 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 ELOVL1Q9BW60 279 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 PRSS37A4D1T9 235 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 BLACEA4D250 179 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 K7EP13 123 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 ACKR1Q16570 336 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 PTPMT1Q8WUK0 201 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-203ENST00000554873 FOXJ2Q9P0K8 574 aa13.7□□□□□ -0.22
SYNE3-203ENST00000554873 NKX6-3A6NJ46 265 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 OR6A2O95222 327 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 CTHP32929 405 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 TMEM241Q24JQ0 296 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 MAML2Q8IZL2 1156 aaPredicted RBP13.69□□□□□ -0.22
SYNE3-203ENST00000554873 FBLN5Q9UBX5 448 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 LOC107986453A0A1B0GWG9 222 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 A0A1W2PN81 502 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 XRCC2O43543 280 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 HCRTR2O43614 444 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 FOSL2P15408 326 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 BCKDHBP21953 392 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 ATP6V0CP27449 155 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 HSD11B1P28845 292 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 CHRNA7P36544 502 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 KLF3P57682 345 aaPredicted RBP13.69□□□□□ -0.22
SYNE3-203ENST00000554873 CHRFAM7AQ494W8 412 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 KCTD18Q6PI47 426 aaPredicted RBP13.69□□□□□ -0.22
SYNE3-203ENST00000554873 WFIKKN1Q96NZ8 548 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 NICN1Q9BSH3 213 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 PNO1Q9NRX1 252 aaKnown RBP13.69□□□□□ -0.22
SYNE3-203ENST00000554873 HS3ST3A1Q9Y663 406 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 ATG2AQ2TAZ0 1938 aa13.69□□□□□ -0.22
SYNE3-203ENST00000554873 TRBV11-1A0A0K0K1C0 115 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ZNF705FA8MVS1 300 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TSPAN2O60636 221 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ZNF705DP0CH99 300 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ZNF705BP0CI00 300 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 CTLA4P16410 223 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ZNF43P17038 809 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 CHRNB4P30926 498 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 RPL27P61353 136 aaKnown RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ZFP36L1Q07352 338 aaKnown RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ZNF266Q14584 549 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 IL13RA2Q14627 380 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TMEM92Q6UXU6 159 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 COX15Q7KZN9 410 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TIPARPQ7Z3E1 657 aaKnown RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 SLC22A24Q8N4F4 322 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 AGBL5Q8NDL9 886 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 GPR119Q8TDV5 335 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ABHD6Q9BV23 337 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 S1PR5Q9H228 398 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 GPR84Q9NQS5 396 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TRAV36DV7A0A075B6V5 113 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 IGLV1-36A0A0B4J1U3 117 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TMEM14DPA8MWL7 114 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 SDCBPO00560 298 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 LINC01565O15544 149 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 HBE1P02100 147 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 HIST1H1DP16402 221 aaKnown RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ZNF519Q8TB69 540 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ADAMTS18Q8TE60 1221 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TBX15Q96SF7 602 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 EHFQ9NZC4 300 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 LRP12Q9Y561 859 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 YLPM1P49750 1951 aaKnown RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 ARID1AO14497 2285 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 LOC102723971A0A1B0GUV8 181 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TNFSF13O75888 250 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 MPZL1O95297 269 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TFPI2P48307 235 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 TAS2R46P59540 309 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 RAB11AP62491 216 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 PLAC9Q5JTB6 97 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 IFI44Q8TCB0 444 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 LANCL2Q9NS86 450 aa13.68□□□□□ -0.22
SYNE3-203ENST00000554873 AURKAIP1Q9NWT8 199 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-203ENST00000554873 VCANP13611 3396 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 LMX1BO60663 402 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 ISG15P05161 165 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 PFN1P07737 140 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms