RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 PDCD6O75340 191 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 OR7C1O76099 320 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-210ENST00000553950 GLAP06280 429 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 EIF4EP06730 217 aaKnown RBP12.19□□□□□ -0.46
SHMT2-210ENST00000553950 ELK1P19419 428 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 GABRR1P24046 479 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 CD80P33681 288 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 MDH2P40926 338 aaKnown RBP12.19□□□□□ -0.46
SHMT2-210ENST00000553950 PMELP40967 661 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 ETV6P41212 452 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 MNDAP41218 407 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 KCNJ3P48549 501 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 PDLIM4P50479 330 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 ATP5J2P56134 94 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 TMEM33P57088 247 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 DSCR9P59020 149 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 BTG1P62324 171 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 MRPS10P82664 201 aaKnown RBP12.19□□□□□ -0.46
SHMT2-210ENST00000553950 PITPNAQ00169 270 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 RBM39Q14498 530 aaKnown RBP12.19□□□□□ -0.46
SHMT2-210ENST00000553950 PIGYQ3MUY2 71 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 SPRNQ5BIV9 151 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 OR10K2Q6IF99 312 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 CNIH2Q6PI25 160 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 CMTM4Q8IZR5 234 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 LRRC75A-AS1Q8N1F1 130 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 FAM89BQ8N5H3 189 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 BOLLQ8N9W6 283 aaKnown RBP12.19□□□□□ -0.46
SHMT2-210ENST00000553950 OR10R2Q8NGX6 335 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 WDR12Q9GZL7 423 aaKnown RBP12.19□□□□□ -0.46
SHMT2-210ENST00000553950 HSF4Q9ULV5 492 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 WIPI2Q9Y4P8 454 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 AKAP6Q13023 2319 aa12.19□□□□□ -0.46
SHMT2-210ENST00000553950 OR2AT4A6NND4 320 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 SERPINE3A8MV23 424 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 HAND1O96004 215 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 GSTP1P09211 210 aaKnown RBP12.18□□□□□ -0.46
SHMT2-210ENST00000553950 ZNF44P15621 663 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 EGR1P18146 543 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 PTH2RP49190 550 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 EFNB2P52799 333 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 ZNF45Q02386 682 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 STUMQ69YW2 141 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 CLEC2AQ6UVW9 174 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 SLC36A1Q7Z2H8 476 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 SPICQ8N5J4 248 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 YIPF5Q969M3 257 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 RAB3CQ96E17 227 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 TSC22D3Q99576 134 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 MIXL1Q9H2W2 232 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHMT2-210ENST00000553950 RCC2Q9P258 522 aaKnown RBP12.18□□□□□ -0.46
SHMT2-210ENST00000553950 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
SHMT2-210ENST00000553950 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-210ENST00000553950 GEMIN2O14893 280 aaKnown RBP12.17□□□□□ -0.46
SHMT2-210ENST00000553950 WNT9BO14905 357 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 DEGS1O15121 323 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 IGHV4-39P01824 125 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 FUT3P21217 361 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 CDK2P24941 298 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 BLVRBP30043 206 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-210ENST00000553950 TNFSF8P32971 234 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 GPR6P46095 362 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-210ENST00000553950 VEGFCP49767 419 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 GMFBP60983 142 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 MRPS15P82914 257 aaKnown RBP12.17□□□□□ -0.46
SHMT2-210ENST00000553950 TAF9Q16594 264 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 TMEM155Q4W5P6 130 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 SHEQ5VZ18 495 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 PYHIN1Q6K0P9 492 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 DCDC5Q6ZRR9 648 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 CCDC190Q86UF4 302 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 BATF2Q8N1L9 274 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 ZNF561Q8N587 486 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 PIMREGQ9BSJ6 248 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 WDR13Q9H1Z4 485 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 ZNF665Q9H7R5 613 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 OR14J1Q9UGF5 321 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 CACNG2Q9Y698 323 aa12.17□□□□□ -0.46
SHMT2-210ENST00000553950 ARID1AO14497 2285 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 FABP12A6NFH5 140 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 F8VVB4 439 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 F8VWA3 439 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 H7C1Q1 480 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 RAB27BO00194 218 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 PPIHO43447 177 aaKnown RBP12.16□□□□□ -0.46
SHMT2-210ENST00000553950 CA11O75493 328 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 PSG2P11465 335 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 HIST1H1DP16402 221 aaKnown RBP12.16□□□□□ -0.46
SHMT2-210ENST00000553950 LMO1P25800 156 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 GIFP27352 417 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 CHATP28329 748 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 SNU13P55769 128 aaKnown RBP12.16□□□□□ -0.46
SHMT2-210ENST00000553950 TAS2R20P59543 309 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 IL18Q14116 193 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 CARTPTQ16568 116 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms