RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 CPNE2Q96FN4 548 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF436Q9C0F3 470 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 DLL4Q9NR61 685 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 PLEKHA6Q9Y2H5 1048 aa10.9□□□□□ -0.66
VIPAS39-206ENST00000553888 SPTA1P02549 2419 aa10.9□□□□□ -0.67
VIPAS39-206ENST00000553888 CNOT4O95628 575 aaKnown RBP10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 IFNA6P05013 189 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 IL5P05113 134 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 OR4E1P0C645 316 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 CBR1P16152 277 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 CALCRP30988 508 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 PSG7Q13046 419 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 OR5L1Q8NGL2 311 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF107Q9UII5 783 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 IGHV1-18A0A0C4DH31 117 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 G3V3Q6 166 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 BMP5P22003 454 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 DCAF12L2Q5VW00 463 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 LAMTOR1Q6IAA8 161 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 HOGA1Q86XE5 327 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 S100PBPQ96BU1 408 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 SNRNP40Q96DI7 357 aaKnown RBP10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 TECTBQ96PL2 329 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 ASF1BQ9NVP2 202 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 NBASA2RRP1 2371 aa10.89□□□□□ -0.67
VIPAS39-206ENST00000553888 SERPINE3A8MV23 424 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 GLI4P10075 376 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF83P51522 516 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 DOLPP1Q86YN1 238 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 OR5H2Q8NGV7 314 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 OR13G1Q8NGZ3 307 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 LILRB4Q8NHJ6 448 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 HIST1H2AAQ96QV6 131 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 PRRT1Q99946 306 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 TMPRSS13Q9BYE2 586 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 GPN1Q9HCN4 374 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 EHFQ9NZC4 300 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 PLCE1Q9P212 2302 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 FAM172BPA6NC97 362 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 DLL1O00548 723 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 GOSR2O14653 212 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF780AO75290 641 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF35P13682 527 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 AKR1C4P17516 323 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 H2BFSP57053 126 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 TSPAN5P62079 268 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 FAM189A2Q15884 450 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 FBXW12Q6X9E4 464 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 FTMTQ8N4E7 242 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 OR5A2Q8NGI9 324 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 KLF14Q8TD94 323 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 CMSS1Q9BQ75 279 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 SLC25A21Q9BQT8 299 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 SLC2A8Q9NY64 477 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 PRR13Q9NZ81 148 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 IL36GQ9NZH8 169 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 PIPOXQ9P0Z9 390 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 KIAA2026Q5HYC2 2103 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 EEF1E1-BLOC1S5C9J1V9 151 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 FABP6P51161 128 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 FAM27E3Q08E93 113 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 MRPL49Q13405 166 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 PPP1R1AQ13522 171 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 KRTCAP3Q53RY4 240 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 ZSCAN4Q8NAM6 433 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 C1orf162Q8NEQ5 155 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 OR2T35Q8NGX2 323 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 MARS2Q96GW9 593 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 DHRS9Q9BPW9 319 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 TMEM246Q9BRR3 403 aa10.88□□□□□ -0.67
VIPAS39-206ENST00000553888 HTR2BP41595 481 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 DHRS2Q13268 280 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 BEND4Q6ZU67 534 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 CCDC36Q8IYA8 594 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 LIME1Q9H400 295 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 OPA3Q9H6K4 179 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 MGAT4AQ9UM21 535 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 SLC25A15Q9Y619 301 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 SNRPGP15A8MWD9 76 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 OR3A3P47888 321 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 MSMPQ1L6U9 139 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 FAM122CQ6P4D5 195 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 GFRALQ6UXV0 394 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF442Q9H7R0 627 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 HSPB11Q9Y547 144 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 ROS1P08922 2347 aa10.87□□□□□ -0.67
VIPAS39-206ENST00000553888 ARID1AO14497 2285 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 IGHV2OR16-5A0A0B4J2B6 119 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 CCSO14618 274 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 HLA-AP01891 365 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 FCGR3AP08637 254 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 SSTP61278 116 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 GNG3P63215 75 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 CDK10Q15131 360 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 CHRFAM7AQ494W8 412 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 AADACL3Q5VUY0 350 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 OR2AK2Q8NG84 335 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms