RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RBMS2Q15434 407 aaKnown RBP13.58□□□□□ -0.24
ACTN1-209ENST00000553659 PNLIPRP3Q17RR3 467 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 ZNF260Q3ZCT1 412 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 ZFP69Q49AA0 526 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 CD276Q5ZPR3 534 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 NAA40Q86UY6 237 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 ZCCHC24Q8N2G6 241 aaKnown RBP13.58□□□□□ -0.24
ACTN1-209ENST00000553659 OR10R2Q8NGX6 335 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 APOBEC3DQ96AK3 386 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-209ENST00000553659 SEH1LQ96EE3 360 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 MED30Q96HR3 178 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 TMEM59Q9BXS4 323 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 SLC7A11Q9UPY5 501 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 SVEP1Q4LDE5 3571 aa13.58□□□□□ -0.24
ACTN1-209ENST00000553659 DYSFO75923 2080 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 ZNF816-ZNF321PA0A0X1KG74 233 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 hCG_38984A0A1B0GV85 526 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 CDC14BO60729 498 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 NDUFB6O95139 128 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 CYB5AP00167 134 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 GTF2F2P13984 249 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 FAHP16930 419 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 PTGFRP43088 359 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 CBX5P45973 191 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 MECP2P51608 486 aaKnown RBP13.57□□□□□ -0.24
ACTN1-209ENST00000553659 UNC119Q13432 240 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 OR8B8Q15620 311 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 ATAD3CQ5T2N8 411 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 METTL11BQ5VVY1 283 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 TMEM42Q69YG0 159 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 Q6ZTK2 550 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 MYPOPQ86VE0 399 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-209ENST00000553659 GLCCI1Q86VQ1 547 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 ZNF584Q8IVC4 421 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 FTMTQ8N4E7 242 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 PAQR4Q8N4S7 273 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-209ENST00000553659 GCDHQ92947 438 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-209ENST00000553659 C1orf159Q96HA4 380 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 ST6GAL2Q96JF0 529 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 MED28Q9H204 178 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 KCNK15Q9H427 330 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 GPN1Q9HCN4 374 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-209ENST00000553659 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
ACTN1-209ENST00000553659 TRAV6A0A075B6T7 132 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 IGHV2OR16-5A0A0B4J2B6 119 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 CA11O75493 328 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 IL5P05113 134 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 CPT2P23786 658 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 APLNRP35414 380 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 SRP14P37108 136 aaKnown RBP13.56□□□□□ -0.24
ACTN1-209ENST00000553659 OR3A4PP47883 348 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 CCR6P51684 374 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 FUT6P51993 359 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 MAB21L1Q13394 359 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 UBE2V2Q15819 145 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 GSG1Q2KHT4 349 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 STEAP1BQ6NZ63 245 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 ZNF782Q6ZMW2 699 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-209ENST00000553659 CHST4Q8NCG5 386 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 CSNK2A3Q8NEV1 391 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 TNFAIP8L1Q8WVP5 186 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 LPAR5Q9H1C0 372 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 GHITMQ9H3K2 345 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 DYNLRB1Q9NP97 96 aa13.56□□□□□ -0.24
ACTN1-209ENST00000553659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.56□□□□□ -0.24
ACTN1-209ENST00000553659 MRPL15Q9P015 296 aaKnown RBP13.56□□□□□ -0.24
ACTN1-209ENST00000553659 A0A0A6YYJ9 748 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 ZNF503-AS2A6NEH8 195 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 DISC1C4P0D8 188 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 GMDSO60547 372 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 CRTAPO75718 401 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-209ENST00000553659 MPIG6BO95866 241 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 CD74P04233 296 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 PATE4P0C8F1 98 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 CD79AP11912 226 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 MPZP25189 248 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 RBP2P50120 134 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 ATP1B3P54709 279 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 RAB1AP62820 205 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 RPS27AP62979 156 aaKnown RBP13.55□□□□□ -0.24
ACTN1-209ENST00000553659 FAM3AP98173 230 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 CD300CQ08708 224 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 CDNFQ49AH0 187 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 ACTBL2Q562R1 376 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 SFRP4Q6FHJ7 346 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-209ENST00000553659 OR10K2Q6IF99 312 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 ZBTB8BQ8NAP8 495 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-209ENST00000553659 OR5L1Q8NGL2 311 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 OR4C16Q8NGL9 310 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 FGFBP3Q8TAT2 258 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 BORCS8Q96FH0 119 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-209ENST00000553659 SLC25A21Q9BQT8 299 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-209ENST00000553659 TM2D1Q9BX74 207 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 METTL9Q9H1A3 318 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 OR51J1Q9H342 316 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 NOX3Q9HBY0 568 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 PTTG3PQ9NZH4 202 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 SCP2D1Q9UJQ7 156 aa13.55□□□□□ -0.24
ACTN1-209ENST00000553659 SNRPGP15A8MWD9 76 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms