RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CEACAM8P31997 349 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OPRM1P35372 400 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 HAAOP46952 286 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 NKX2-5P52952 324 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 UCP2P55851 309 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 ARPC4P59998 168 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 SEC61A1P61619 476 aaKnown RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 CYCSP99999 105 aaKnown RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 NHLH1Q02575 133 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 DHRS2Q13268 280 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 RBM39Q14498 530 aaKnown RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 TAF9Q16594 264 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 TIMM23BQ5SRD1 257 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 ZNF324BQ6AW86 544 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OR52W1Q6IF63 320 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 ZNF585AQ6P3V2 769 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 DHRS11Q6UWP2 260 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 C22orf34Q6ZV56 151 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 NCCRP1Q6ZVX7 275 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 SLC25A26Q70HW3 274 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 NLRC3Q7RTR2 1065 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 TMED4Q7Z7H5 227 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 GCNT2Q8N0V5 402 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 FBXL14Q8N1E6 418 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 C9orf62Q8N4C0 152 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OR10AD1Q8NGE0 317 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OR5M9Q8NGP3 310 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OR5M8Q8NGP6 311 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OR10K1Q8NGX5 313 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 FAM57AQ8TBR7 257 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 HPSE2Q8WWQ2 592 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 STARD4Q96DR4 205 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 FAM210AQ96ND0 272 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 ST6GALNAC5Q9BVH7 336 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 TREM2Q9NZC2 230 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 RCC2Q9P258 522 aaKnown RBP6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OPN4Q9UHM6 478 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 GPR160Q9UJ42 338 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 TUBD1Q9UJT1 453 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 MGAT4AQ9UM21 535 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 WASF3Q9UPY6 502 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 OSGIN2Q9Y236 505 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 SPEF1Q9Y4P9 236 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 CFAP54Q96N23 3096 aa6.26□□□□□ -1.41
ATXN3-221ENST00000553498 TRBV6-6A0A0A6YYG2 114 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 KIR2DS1A0A191URI9 304 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 A0A1B0GWJ7 208 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 C9orf170A2RU37 121 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 PRRG2O14669 202 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 GEMIN2O14893 280 aaKnown RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 NOS1APO75052 506 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 LYZL6O75951 148 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 SLC22A5O76082 557 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 DIRAS3O95661 229 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 CD8AP01732 235 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 HLA-AP01891 365 aaKnown RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 PMP2P02689 132 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 SFTPBP07988 381 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 FCGR3AP08637 254 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 CCL2P13500 99 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 ZNF35P13682 527 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 PPP3CBP16298 524 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 KITLGP21583 273 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 CD34P28906 385 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 CALCRP30988 508 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 MDH2P40926 338 aaKnown RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 KIR2DS4P43632 304 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 IDH3GP51553 393 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 GPM6AP51674 278 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 UCP3P55916 312 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 IL13RA1P78552 427 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 IFITM2Q01629 132 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 IKZF1Q13422 519 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 HLXQ14774 488 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 KIR2DS1Q14954 304 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 SHEQ5VZ18 495 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 MBNL2Q5VZF2 373 aaKnown RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 SIGIRRQ6IA17 410 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 VWA1Q6PCB0 445 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 FIP1L1Q6UN15 594 aaKnown RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 RFPL4BQ6ZWI9 263 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 BHLHA15Q7RTS1 189 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 C6orf201Q7Z4U5 140 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 CALHM1Q8IU99 346 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 WDR31Q8NA23 367 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 UXS1Q8NBZ7 420 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 COQ8AQ8NI60 647 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 OR51I2Q9H344 312 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 BEX1Q9HBH7 125 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 ZNF286AQ9HBT8 521 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 ZNF701Q9NV72 531 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 EHFQ9NZC4 300 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 PIPOXQ9P0Z9 390 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 SLC23A1Q9UHI7 598 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 C14orf166Q9Y224 244 aaKnown RBP6.25□□□□□ -1.41
ATXN3-221ENST00000553498 VSIG4Q9Y279 399 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 HSPB11Q9Y547 144 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 ZNF318Q5VUA4 2279 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 OTOGLQ3ZCN5 2332 aa6.25□□□□□ -1.41
ATXN3-221ENST00000553498 TTC28Q96AY4 2481 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms