RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 OR5H1A6NKK0 313 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 F5H5K5 113 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 STMND1H3BQB6 276 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 PHOX2AO14813 284 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 GEMIN2O14893 280 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 EREGO14944 169 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 IGKV3-11P04433 115 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 CHRM2P08172 466 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 SRP19P09132 144 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 IFI6P09912 130 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OR5H8P0DN80 308 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 GABRR1P24046 479 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 SLC6A8P48029 635 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 CLDN17P56750 224 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 TAS2R60P59551 318 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 CHRFAM7AQ494W8 412 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OGFOD3Q6PK18 319 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 DNM1P34Q6PK57 102 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 SULF2Q8IWU5 870 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OR5L1Q8NGL2 311 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OR14K1Q8NGZ2 314 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 KCNG3Q8TAE7 436 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 SSC4DQ8WTU2 575 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 EMG1Q92979 244 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 LYZL4Q96KX0 146 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OR10A2Q9H208 303 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OPA3Q9H6K4 179 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 C1orf123Q9NWV4 160 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 LUZP4Q9P127 313 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FBLN5Q9UBX5 448 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ESPL1Q14674 2120 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ANGPTL7O43827 346 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 SOX15O60248 233 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF43P17038 809 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FUT3P21217 361 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 CHATP28329 748 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 UBE2KP61086 200 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 EIF5AP63241 154 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ICAM4Q14773 271 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 KISS1Q15726 138 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 HIKESHIQ53FT3 197 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF880Q6PDB4 577 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FAM57BQ71RH2 274 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 BATF2Q8N1L9 274 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF664Q8N3J9 261 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FAM89BQ8N5H3 189 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 STT3BQ8TCJ2 826 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 PIGTQ969N2 578 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FAAP24Q9BTP7 215 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 MAGT1Q9H0U3 335 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 HSF4Q9ULV5 492 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 WASF3Q9UPY6 502 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 IGSF23A1L1A6 192 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 PPP1R2P9O14990 202 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 TSPAN2O60636 221 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 TMEM50AO95807 157 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 TMEM225BP0DP42 221 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 MMP9P14780 707 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FAHP16930 419 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ATP6V0CP27449 155 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 POLR2HP52434 150 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 HSF1Q00613 529 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 TMEM187Q14656 261 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OR8G1Q15617 311 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FAM180AQ6UWF9 173 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF429Q86V71 674 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 KDF1Q8NAX2 398 aaPredicted RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OR1L3Q8NH93 324 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 THOC3Q96J01 351 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 PACRGQ96M98 296 aaPredicted RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 OR6C1Q96RD1 312 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 CCNL2Q96S94 520 aaPredicted RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 NEU1Q99519 415 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 DEFB126Q9BYW3 111 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 WWTR1Q9GZV5 400 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 PNRC2Q9NPJ4 139 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 FSCN3Q9NQT6 498 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 GLRX2Q9NS18 164 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 B3GAT1Q9P2W7 334 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 C14orf166Q9Y224 244 aaKnown RBP4.23□□□□□ -1.73
LIMA1-214ENST00000552783 KCNIP3Q9Y2W7 256 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 LRP4O75096 1905 aa4.23□□□□□ -1.73
LIMA1-214ENST00000552783 SHISA7A6NL88 538 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 ALG1L2C9J202 215 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF587BE7ETH6 402 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 CST7O76096 145 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 MT-ATP6P00846 226 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 IGHMP01871 453 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 GZMBP10144 247 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 PAX1P15863 534 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 CD27P26842 260 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 G0S2P27469 103 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 ZFP36L1Q07352 338 aaKnown RBP4.22□□□□□ -1.73
LIMA1-214ENST00000552783 LPAL2Q16609 132 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 CLEC12BQ2HXU8 276 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 RAET1LQ5VY80 246 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 SP5Q6BEB4 398 aaPredicted RBP4.22□□□□□ -1.73
LIMA1-214ENST00000552783 LRP11Q86VZ4 500 aa4.22□□□□□ -1.73
LIMA1-214ENST00000552783 SGPP2Q8IWX5 399 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms