RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 CPN2P22792 545 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 COL8A2P25067 703 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 DDOSTP39656 456 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 PTGDSP41222 190 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 GLP1RP43220 463 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 OR3A4PP47883 348 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 RPS15AP62244 130 aaKnown RBP2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ACTA2P62736 377 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 DYNLT1P63172 113 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ACTG2P63267 376 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ACTC1P68032 377 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ACTA1P68133 377 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ADARB1P78563 741 aaKnown RBP2.87□□□□□ -1.95
LIMA1-208ENST00000551691 RELAQ04206 551 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 AANATQ16613 207 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 GFI1BQ5VTD9 330 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ULK3Q6PHR2 472 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 CMC1Q7Z7K0 106 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF546Q86UE3 836 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF100Q8IYN0 542 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 MS4A15Q8N5U1 240 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 MORN4Q8NDC4 146 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 CLDND2Q8NHS1 167 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 RHOXF1Q8NHV9 184 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 LYPD6BQ8NI32 183 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 FANK1Q8TC84 345 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 LRRC20Q8TCA0 184 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 NEIL2Q969S2 332 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 SMIM10Q96HG1 83 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ATP6V1G3Q96LB4 118 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 RNF157Q96PX1 679 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 KLHDC3Q9BQ90 382 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 RNF167Q9H6Y7 350 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 SIAEQ9HAT2 523 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 NTN4Q9HB63 628 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 NLE1Q9NVX2 485 aaPredicted RBP2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ABCD2Q9UBJ2 740 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF337Q9Y3M9 751 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 RHBDD3Q9Y3P4 386 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 MMP24Q9Y5R2 645 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 IGHV3OR16-13A0A075B7E8 117 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 UQCRHLA0A096LP55 91 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 LOC100506127A0A0U1RQW1 187 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 A0A1W2PRD5 423 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CLPSL1A2RUU4 121 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 A6NIZ1 184 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CENPXA8MT69 81 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CTNSO60931 367 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF253O75346 499 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 FCN3O75636 299 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 SMC2O95347 1197 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 IGHV3-13P01766 116 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CLPSP04118 112 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 KRT16P08779 473 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 ACSM4P0C7M7 580 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 RBMY1A1P0DJD3 496 aaKnown RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 MGMTP16455 207 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 IL32P24001 234 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 KDELR1P24390 212 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 MSNP26038 577 aaKnown RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 P2RY4P51582 365 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CTBP2P56545 445 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 RAP1BP61224 184 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 LMO4P61968 165 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 PAX2Q02962 417 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 STX4Q12846 297 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 POU6F1Q14863 301 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 LRRC36Q1X8D7 754 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 FAM83EQ2M2I3 478 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF829Q3KNS6 432 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 Q3ZCU0 254 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 ACSBG2Q5FVE4 666 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 OR2G6Q5TZ20 316 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 TFAP2EQ6VUC0 442 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 MBOAT1Q6ZNC8 495 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 BHLHA15Q7RTS1 189 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 PPP1R27Q86WC6 154 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CMTM1Q8IZ96 169 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 SYCE1Q8N0S2 351 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 LYG1Q8N1E2 194 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 TMEM252Q8N6L7 170 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CCDC71LQ8N9Z2 235 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 OR6K3Q8NGY3 331 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 MUC7Q8TAX7 377 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF596Q8TC21 504 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 ITCHQ96J02 903 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 OXGR1Q96P68 337 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 OLFM3Q96PB7 478 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 EBNA1BP2Q99848 306 aaKnown RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 EBF4Q9BQW3 602 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 TRIM15Q9C019 465 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 RANBP3Q9H6Z4 567 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 BEX1Q9HBH7 125 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 FGF20Q9NP95 211 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 EXD2Q9NVH0 621 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 CCDC59Q9P031 241 aaKnown RBP2.86□□□□□ -1.95
LIMA1-208ENST00000551691 MMACHCQ9Y4U1 282 aa2.86□□□□□ -1.95
LIMA1-208ENST00000551691 U3KQK5 164 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms