RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TRBV2A0A0J9YWF9 115 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 MGST3O14880 152 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 SYT7O43581 403 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 SULT1C4O75897 302 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 DUS4LO95620 317 aaKnown RBP10.29□□□□□ -0.76
PTCH1-221ENST00000550914 HAND1O96004 215 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 SERPINA3P01011 423 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 IGLL1P15814 213 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 BRS3P32247 399 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 DAPP51397 102 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 ARHGDIBP52566 201 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 CDC42P60953 191 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 SLC35A2P78381 396 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 BDH1Q02338 343 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 ZNF91Q05481 1191 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 ZNF146Q15072 292 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 GRK1Q15835 563 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 TMEM95Q3KNT9 176 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 SPIN3Q5JUX0 258 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 OR52W1Q6IF63 320 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 SLC25A26Q70HW3 274 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 BCDIN3DQ7Z5W3 292 aaKnown RBP10.29□□□□□ -0.76
PTCH1-221ENST00000550914 RTN4RL2Q86UN3 420 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 TCEANCQ8N8B7 351 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 YIPF7Q8N8F6 280 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 CCDC197Q8NCU1 140 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 DNAAF1Q8NEP3 725 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 OR4P4Q8NGL7 312 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 PP6455Q8WZ26 134 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
PTCH1-221ENST00000550914 SLAMF9Q96A28 289 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 BORCS8Q96FH0 119 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 RCC1LQ96I51 464 aaKnown RBP10.29□□□□□ -0.76
PTCH1-221ENST00000550914 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 WARS2Q9UGM6 360 aaKnown RBP10.29□□□□□ -0.76
PTCH1-221ENST00000550914 GLS2Q9UI32 602 aa10.29□□□□□ -0.76
PTCH1-221ENST00000550914 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-221ENST00000550914 MEX3AA1L020 520 aaKnown RBP10.28□□□□□ -0.76
PTCH1-221ENST00000550914 METTL15A6NJ78 407 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 ZAR1LA6NP61 321 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 CYB5AP00167 134 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 IGHA1P01876 353 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 OR2T7P0C7T2 308 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 JUNBP17275 347 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-221ENST00000550914 GABRR1P24046 479 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 P2RX3P56373 397 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 DNAL1Q4LDG9 190 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 VAX1Q5SQQ9 334 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 C12orf73Q69YU5 71 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 HEPN1Q6WQI6 88 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 CENPVQ7Z7K6 275 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-221ENST00000550914 FAM58AQ8N1B3 248 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 OR52N4Q8NGI2 321 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 CAPSLQ8WWF8 208 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 UTP4Q969X6 686 aaKnown RBP10.28□□□□□ -0.76
PTCH1-221ENST00000550914 CREB3L1Q96BA8 519 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 ADI1Q9BV57 179 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 GAL3ST2Q9H3Q3 398 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 KRT84Q9NSB2 600 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 ENOPH1Q9UHY7 261 aa10.28□□□□□ -0.76
PTCH1-221ENST00000550914 A0A1W2PRX2 142 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 TCRBV4S1A1TA0A5B7 111 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 FUOMA2VDF0 154 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 K7EIL1 84 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 M0QZK8 103 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 PSPNO60542 156 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 OR2F2O95006 317 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 RPP14O95059 124 aaKnown RBP10.27□□□□□ -0.77
PTCH1-221ENST00000550914 MPIG6BO95866 241 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 PF4P02776 101 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 UBCP0CG48 685 aaKnown RBP10.27□□□□□ -0.77
PTCH1-221ENST00000550914 CD34P28906 385 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 RBP2P50120 134 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 ATP1B3P54709 279 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 ODF4Q2M2E3 257 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 TCTEX1D4Q5JR98 221 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 SSX6Q7RTT6 188 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 ABHD12Q8N2K0 398 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 TPRX1Q8N7U7 411 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 OR4X2Q8NGF9 303 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 CORO2AQ92828 525 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 CHST6Q9GZX3 395 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 RBFOX1Q9NWB1 397 aaKnown RBP10.27□□□□□ -0.77
PTCH1-221ENST00000550914 TAS2R3Q9NYW6 316 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 POMPQ9Y244 141 aa10.27□□□□□ -0.77
PTCH1-221ENST00000550914 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 LOC107986453A0A1B0GWG9 222 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 A0A1W2PQL4 384 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-221ENST00000550914 LEUTXA8MZ59 168 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 M0R129 80 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 ENTPD6O75354 484 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 MMP23AO75900 390 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 CLIC3O95833 236 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 IGLV1-47P01700 117 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 PRKACBP22694 351 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 EPHA2P29317 976 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 HTR1FP30939 366 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 CEACAM3P40198 252 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms