RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 DNAAF3Q8N9W5 541 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 LFNGQ8NES3 379 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 ATP6V1C2Q8NEY4 427 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 OR4M1Q8NGD0 313 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 OR4K2Q8NGD2 314 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 OR5W2Q8NH69 310 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 OR2AE1Q8NHA4 323 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 BLNKQ8WV28 456 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 ANP32BQ92688 251 aaKnown RBP1.8□□□□□ -2.12
CCDC38-208ENST00000549876 GHSRQ92847 366 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 TMEM159Q96B96 161 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 WDR34Q96EX3 536 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 PDXPQ96GD0 296 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 NARS2Q96I59 477 aaKnown RBP1.8□□□□□ -2.12
CCDC38-208ENST00000549876 C8orf76Q96K31 380 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 C18orf15Q96N68 181 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 QKIQ96PU8 341 aaKnown RBP eCLIP1.8□□□□□ -2.12
CCDC38-208ENST00000549876 SPACA5Q96QH8 159 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 PITX2Q99697 317 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 RBBP8Q99708 897 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 DCUN1D5Q9BTE7 237 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 FGF23Q9GZV9 251 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-208ENST00000549876 PLEKHF2Q9H8W4 249 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 ZNRD1Q9P1U0 126 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 POLR3AO14802 1390 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-208ENST00000549876 GPATCH8Q9UKJ3 1502 aaKnown RBP1.8□□□□□ -2.12
CCDC38-208ENST00000549876 ADAMTSL3P82987 1691 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 SIGLEC1Q9BZZ2 1709 aa1.8□□□□□ -2.12
CCDC38-208ENST00000549876 IGHV7-4-1A0A0J9YVY3 117 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 A0A1W2PP18 115 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 TMEM223A0PJW6 202 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 OR5H1A6NKK0 313 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 H0YJW9 148 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 J3QLI3 93 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 LIN7AO14910 233 aaPredicted RBP1.79□□□□□ -2.12
CCDC38-208ENST00000549876 SLC31A1O15431 190 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 COCHO43405 550 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 CYTH3O43739 400 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 GATBO75879 557 aaKnown RBP1.79□□□□□ -2.12
CCDC38-208ENST00000549876 KLHL2O95198 593 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 MPZL1O95297 269 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 AHSA1O95433 338 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 HLA-DQA1P01909 254 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 ORM1P02763 201 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 RLN2P04090 185 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 OR4Q2P0C623 313 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 TAC1P20366 129 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 IL3RAP26951 378 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 PSMB9P28065 219 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 SLC18A1P54219 525 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 RAB8AP61006 207 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 SYCNQ0VAF6 134 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 ADIGQ0VDE8 80 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 PMVKQ15126 192 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 SLC25A35Q3KQZ1 300 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 ATP6AP1LQ52LC2 224 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 RNASE13Q5GAN3 156 aaKnown RBP1.79□□□□□ -2.12
CCDC38-208ENST00000549876 DNLZQ5SXM8 178 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 SDHAF4Q5VUM1 108 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 LAMTOR1Q6IAA8 161 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 CLEC18BQ6UXF7 455 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 USP50Q70EL3 339 aaPredicted RBP1.79□□□□□ -2.12
CCDC38-208ENST00000549876 CALHM3Q86XJ0 350 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 FUNDC1Q8IVP5 155 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 CCNYL1Q8N7R7 359 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 OR4M2Q8NGB6 313 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 OR4K5Q8NGD3 323 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 ACTL9Q8TC94 416 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 S100PBPQ96BU1 408 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 MRAP2Q96G30 205 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 SMIM8Q96KF7 97 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF382Q96SR6 550 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF649Q9BS31 505 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 SPZ1Q9BXG8 430 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 DRC3Q9H069 523 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 RDH14Q9HBH5 336 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 EXOSC4Q9NPD3 245 aaKnown RBP1.79□□□□□ -2.12
CCDC38-208ENST00000549876 C8orf17Q9NRJ1 99 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 NAGKQ9UJ70 344 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 RFNGQ9Y644 331 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 TMEM14AQ9Y6G1 99 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 ENPP4Q9Y6X5 453 aa1.79□□□□□ -2.12
CCDC38-208ENST00000549876 NRCAMQ92823 1304 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 A0A1B0GXF2 115 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 RBFOX3A6NFN3 312 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 CENPBD1B2RD01 187 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 FTCDNL1E5RQL4 147 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 PHYHO14832 338 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 FGF16O43320 207 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF207O43670 478 aaKnown RBP1.78□□□□□ -2.12
CCDC38-208ENST00000549876 MPZL2O60487 215 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 PSIP1O75475 530 aaKnown RBP1.78□□□□□ -2.12
CCDC38-208ENST00000549876 HLA-AP01891 365 aaKnown RBP1.78□□□□□ -2.12
CCDC38-208ENST00000549876 CDK1P06493 297 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 TSPOP30536 169 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 MAGEA2P43356 314 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 KIR3DL2P43630 455 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 C1QTNF8P60827 252 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 PPP1CAP62136 330 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 RPL10AP62906 217 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms