RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ELF3P78545 371 aaPredicted RBP2.45□□□□□ -2.02
SNRPF-202ENST00000549580 DMC1Q14565 340 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 ATP6AP1LQ52LC2 224 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 OR10J3Q5JRS4 329 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 CLEC12AQ5QGZ9 265 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 UNQ9165/PRO28630Q6UXU0 137 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 PLCZ1Q86YW0 608 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 RNASEH2CQ8TDP1 164 aaKnown RBP2.45□□□□□ -2.02
SNRPF-202ENST00000549580 ORAOV1Q8WV07 137 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 PPWD1Q96BP3 646 aaKnown RBP2.45□□□□□ -2.02
SNRPF-202ENST00000549580 PITX2Q99697 317 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 APOL4Q9BPW4 351 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 ING2Q9H160 280 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 LHX5Q9H2C1 402 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 ZSCAN16Q9H4T2 348 aaPredicted RBP2.45□□□□□ -2.02
SNRPF-202ENST00000549580 SCML1Q9UN30 329 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 PSMD13Q9UNM6 376 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 SLC22A14Q9Y267 594 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 KLF13Q9Y2Y9 288 aaPredicted RBP2.45□□□□□ -2.02
SNRPF-202ENST00000549580 SLIT3O75094 1523 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 TMEM131Q92545 1883 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 ELP1O95163 1332 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 LOC102724200A0A096LPH7 203 aaPredicted RBP2.44□□□□□ -2.02
SNRPF-202ENST00000549580 KIR2DS1A0A191URI9 304 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 LRCOL1A6NCL2 159 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 FABP12A6NFH5 140 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 RBFOX3A6NFN3 312 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ZNF850A8MQ14 1090 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ITGB1BP1O14713 200 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 MAS1P04201 325 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ZNF32P17041 273 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 GCLMP48507 274 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ACOT2P49753 483 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 CCL23P55773 120 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 OR10A3P58181 314 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 RHOAP61586 193 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 BAXQ07812 192 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 PIGHQ14442 188 aaPredicted RBP2.44□□□□□ -2.02
SNRPF-202ENST00000549580 COX19Q49B96 90 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ACTBL2Q562R1 376 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 CLLU1OSQ5K130 101 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 KCTD16Q68DU8 428 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ZNF880Q6PDB4 577 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 USP50Q70EL3 339 aaPredicted RBP2.44□□□□□ -2.02
SNRPF-202ENST00000549580 CYP4Z2PQ8N1L4 340 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 SLC26A10Q8NG04 563 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 OR52N1Q8NH53 320 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 FAM45AQ8TCE6 357 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 BIRC8Q96P09 236 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 HBEGFQ99075 208 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 DCUN1D5Q9BTE7 237 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ASB7Q9H672 318 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 PARVGQ9HBI0 331 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 SND1-IT1Q9HBX3 110 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 ASCL3Q9NQ33 180 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 FBXO6Q9NRD1 293 aaPredicted RBP2.44□□□□□ -2.02
SNRPF-202ENST00000549580 RBM22Q9NW64 420 aaKnown RBP eCLIP2.44□□□□□ -2.02
SNRPF-202ENST00000549580 NKIRAS1Q9NYS0 192 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 TAS2R5Q9NYW4 299 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 INSIG2Q9Y5U4 225 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 S4R3C0 116 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 KIAA0232Q92628 1395 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 TRIOBPQ9H2D6 2365 aa2.44□□□□□ -2.02
SNRPF-202ENST00000549580 IGKV2-28A0A075B6P5 120 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 A8MWL6 223 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 TOX3O15405 576 aaPredicted RBP2.43□□□□□ -2.02
SNRPF-202ENST00000549580 AQP9O43315 295 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 E2F6O75461 281 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 OR2A4O95047 310 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 RAB36O95755 333 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 LHBP01229 141 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 IGKV2D-28P01615 120 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 SNRPAP09012 282 aaKnown RBP2.43□□□□□ -2.02
SNRPF-202ENST00000549580 LIMS3P0CW19 117 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 LIMS4P0CW20 117 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 LINC00315P59091 139 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 PITPNAQ00169 270 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 ZNF616Q08AN1 781 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 BNIP2Q12982 314 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 MOBPQ13875 183 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 ZNHIT3Q15649 155 aaPredicted RBP2.43□□□□□ -2.02
SNRPF-202ENST00000549580 SP6Q3SY56 376 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 FAM231DQ6ZW35 169 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 PRNTQ86SH4 94 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 C10orf107Q8IVU9 208 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 OSR2Q8N2R0 312 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 OR2Z1Q8NG97 314 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 FAM57AQ8TBR7 257 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 ACTL9Q8TC94 416 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 DYNC2LI1Q8TCX1 351 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 TNFRSF14Q92956 283 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 MRAP2Q96G30 205 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 OR2A7Q96R45 310 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 API5Q9BZZ5 524 aaKnown RBP2.43□□□□□ -2.02
SNRPF-202ENST00000549580 PARP11Q9NR21 331 aa2.43□□□□□ -2.02
SNRPF-202ENST00000549580 NRCAMQ92823 1304 aa2.42□□□□□ -2.02
SNRPF-202ENST00000549580 PCM1Q15154 2024 aa2.42□□□□□ -2.02
SNRPF-202ENST00000549580 LOC389332A0A1B0GUA5 103 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms