RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 HSF4Q9ULV5 492 aa9.35□□□□□ -0.91
NPAS3-205ENST00000547068 CLDN16Q9Y5I7 305 aa9.35□□□□□ -0.91
NPAS3-205ENST00000547068 PHF3Q92576 2039 aaKnown RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 TECTAO75443 2155 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 TMED7-TICAM2A0A0A6YYA0 188 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 A0A0J9YY10 115 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 XKRY2A2RUG3 117 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 NPIPA5E9PKD4 350 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 RRP8O43159 456 aaKnown RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 DLEU1O43261 78 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 SEMA4FO95754 770 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 IGLV3-19P01714 112 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 MMP7P09237 267 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 OR4A8P0C604 315 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 ALDH3B1P43353 468 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 CSNK1A1P48729 337 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 SLC37A1P57057 533 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 PAX5Q02548 391 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 ABLIM2Q6H8Q1 611 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 C9orf40Q8IXQ3 194 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 OR10J5Q8NHC4 309 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 OIT3Q8WWZ8 545 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 FAM71F1Q96KD3 344 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 C18orf12Q96KH6 178 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 HIST1H2AAQ96QV6 131 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 TMEM208Q9BTX3 173 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 DECR2Q9NUI1 292 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 HRASLS2Q9NWW9 162 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 NPIPA1Q9UND3 350 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 CDC14CA4D256 554 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 FOXI3A8MTJ6 420 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 HBE1P02100 147 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 CLPSP04118 112 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 ZNF728P0DKX0 622 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 ZNF43P17038 809 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 ERVFC1-1P60608 527 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 TLE4Q04727 773 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 RAB35Q15286 201 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 ANKRD39Q53RE8 183 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 C1orf189Q5VU69 101 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 SP5Q6BEB4 398 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 THNSL2Q86YJ6 484 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 C17orf78Q8N4C9 275 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 OR10S1Q8NGN2 331 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 C11orf40Q8WZ69 217 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 TSACCQ96A04 125 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 SYT3Q9BQG1 590 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 IL17BQ9UHF5 180 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 MCTS1Q9ULC4 181 aaKnown RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 B3GALT1Q9Y5Z6 326 aa9.34□□□□□ -0.91
NPAS3-205ENST00000547068 ARHGEF17Q96PE2 2063 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-205ENST00000547068 NPIPB7O75200 414 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 PITX3O75364 302 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 METTL15P1P0C7V9 234 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM225BP0DP42 221 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 PGCP20142 388 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 IL11P20809 199 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 ARL6IP1Q15041 203 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 IQCJQ1A5X6 159 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM31Q5JXX7 168 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 DCAF10Q5QP82 559 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 FAM90A2PQ658T7 463 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 SLC25A26Q70HW3 274 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 C6orf201Q7Z4U5 140 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 C1QL2Q7Z5L3 287 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 C1orf210Q8IVY1 113 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 CMTM1Q8IZ96 169 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM123Q8N131 208 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 LGI3Q8N145 548 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF321PQ8N8H1 164 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 LRTM2Q8N967 370 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 RLN3Q8WXF3 142 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 ASB10Q8WXI3 467 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 HDHD3Q9BSH5 251 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-205ENST00000547068 LIME1Q9H400 295 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 FAM60AQ9NP50 221 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 VAX2Q9UIW0 290 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 GAB2Q9UQC2 676 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 PCNX3Q9H6A9 2034 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 LOC102723971A0A1B0GUV8 181 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 IGSF23A1L1A6 192 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 FAM221AA4D161 298 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 C17orf105B2RV13 164 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 K7ESF4 209 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF205O95201 554 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 NPSP0C0P6 89 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 POLR2HP52434 150 aaKnown RBP9.33□□□□□ -0.92
NPAS3-205ENST00000547068 FXYD4P59646 89 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 PPP1CAP62136 330 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 FOXF1Q12946 379 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 PHLDA2Q53GA4 152 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 RTL6Q6ICC9 239 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 CPEB2Q7Z5Q1 589 aaKnown RBP9.33□□□□□ -0.92
NPAS3-205ENST00000547068 WDFY1Q8IWB7 410 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 OR5L1Q8NGL2 311 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 NPRL2Q8WTW4 380 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM171Q8WVE6 324 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms