RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SP140LQ9H930 580 aa7.46□□□□□ -1.22
SSH1-205ENST00000546812 GAR1Q9NY12 217 aaKnown RBP7.46□□□□□ -1.22
SSH1-205ENST00000546812 MRPL15Q9P015 296 aaKnown RBP7.46□□□□□ -1.22
SSH1-205ENST00000546812 NUFIP1Q9UHK0 495 aaKnown RBP7.46□□□□□ -1.22
SSH1-205ENST00000546812 OR52A1Q9UKL2 312 aa7.46□□□□□ -1.22
SSH1-205ENST00000546812 BLOC1S6Q9UL45 172 aa7.46□□□□□ -1.22
SSH1-205ENST00000546812 SLC22A13Q9Y226 551 aa7.46□□□□□ -1.22
SSH1-205ENST00000546812 TPRKBQ9Y3C4 175 aa7.46□□□□□ -1.22
SSH1-205ENST00000546812 SNX5Q9Y5X3 404 aa7.46□□□□□ -1.22
SSH1-205ENST00000546812 hCG_38984A0A1B0GV85 526 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 GGT3PA6NGU5 568 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 VGLL3A8MV65 326 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 E9PI62 339 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 H3BSH0 61 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 RGS10O43665 173 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 TTRP02766 147 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 HTR1AP08908 422 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 AMY2BP19961 511 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 NANOS3P60323 173 aaKnown RBP7.45□□□□□ -1.22
SSH1-205ENST00000546812 GABARAPL2P60520 117 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 DMRTC1Q5HYR2 192 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 NKAPLQ5M9Q1 402 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 ATPAF1Q5TC12 328 aaPredicted RBP7.45□□□□□ -1.22
SSH1-205ENST00000546812 TMPRSS11AQ6ZMR5 421 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 C11orf53Q8IXP5 236 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 ZFP41Q8N8Y5 198 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 OR5AU1Q8NGC0 362 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 OR56B2PQ8NGI1 322 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 OR5D13Q8NGL4 314 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 OR2G2Q8NGZ5 317 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 OR52N1Q8NH53 320 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 OR51E1Q8TCB6 317 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 SPSB4Q96A44 273 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 SGK3Q96BR1 496 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 C12orf43Q96C57 262 aaKnown RBP7.45□□□□□ -1.22
SSH1-205ENST00000546812 MYCBPQ99417 103 aaPredicted RBP7.45□□□□□ -1.22
SSH1-205ENST00000546812 DUSP21Q9H596 190 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 GPR84Q9NQS5 396 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 C14orf119Q9NWQ9 140 aa7.45□□□□□ -1.22
SSH1-205ENST00000546812 CHCHD3Q9NX63 227 aaKnown RBP7.45□□□□□ -1.22
SSH1-205ENST00000546812 TRBV23-1A0A0A0MS06 115 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.44□□□□□ -1.22
SSH1-205ENST00000546812 A0A0U1RQV5 110 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 LOC107986453A0A1B0GWG9 222 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 A0A1W2PQ09 198 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 TCRBV4S1A1TA0A5B7 111 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 ACOD1A6NK06 481 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.44□□□□□ -1.22
SSH1-205ENST00000546812 LALBAP00709 142 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 IGLV3-1P01715 115 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 ALDOBP05062 364 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 CHRM2P08172 466 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 SELLP14151 372 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 CFL1P23528 166 aaKnown RBP7.44□□□□□ -1.22
SSH1-205ENST00000546812 MAP2K4P45985 399 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 GSK3AP49840 483 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 GTF2A1P52655 376 aaPredicted RBP7.44□□□□□ -1.22
SSH1-205ENST00000546812 GBX2P52951 348 aaPredicted RBP7.44□□□□□ -1.22
SSH1-205ENST00000546812 WNT4P56705 351 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 FAM3AP98173 230 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 IRF3Q14653 427 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 TCTEX1D4Q5JR98 221 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 XAF1Q6GPH4 301 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 FDX2Q6P4F2 183 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 Q6ZS46 218 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 KCTD20Q7Z5Y7 419 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 ELMOD2Q8IZ81 293 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 LRRC29Q8WV35 223 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 SEH1LQ96EE3 360 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 MND1Q9BWT6 205 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 RGCCQ9H4X1 137 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 OPA3Q9H6K4 179 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 ZMAT5Q9UDW3 170 aaKnown RBP7.44□□□□□ -1.22
SSH1-205ENST00000546812 TCF19Q9Y242 345 aa7.44□□□□□ -1.22
SSH1-205ENST00000546812 TSSC4Q9Y5U2 329 aaPredicted RBP7.44□□□□□ -1.22
SSH1-205ENST00000546812 A0A1B0GTI1 187 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 PNMA8CA0A1B0GUJ8 204 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 A6NDX4 124 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 OR4C45A6NMZ5 311 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 F2RL2O00254 374 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 SYNGR1O43759 233 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 UBCP0CG48 685 aaKnown RBP7.43□□□□□ -1.22
SSH1-205ENST00000546812 ACKR3P25106 362 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 VDAC2P45880 294 aaPredicted RBP7.43□□□□□ -1.22
SSH1-205ENST00000546812 RAB13P51153 203 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 BLCAPP62952 87 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 MRPL28Q13084 256 aaKnown RBP7.43□□□□□ -1.22
SSH1-205ENST00000546812 ALKBH1Q13686 389 aaKnown RBP7.43□□□□□ -1.22
SSH1-205ENST00000546812 CDK5R1Q15078 307 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 TMEM95Q3KNT9 176 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 ARSJQ5FYB0 599 aaPredicted RBP7.43□□□□□ -1.22
SSH1-205ENST00000546812 STUMQ69YW2 141 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 PRSS48Q7RTY5 328 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 TMEM219Q86XT9 240 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 ZNF676Q8N7Q3 588 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 NANOGP1Q8N7R0 232 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 LINC00482Q8N8I6 264 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 ZNF485Q8NCK3 441 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 OR5T2Q8NGG2 359 aa7.43□□□□□ -1.22
SSH1-205ENST00000546812 OR10AC1Q8NH08 325 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms