RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 C22orf39Q6P5X5 142 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 C16orf87Q6PH81 154 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 NCCRP1Q6ZVX7 275 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-222ENST00000545308 ZNF584Q8IVC4 421 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 TMEM183AQ8IXX5 376 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 FAM71AQ8IYT1 594 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 MDS2Q8NDY4 140 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 OR6X1Q8NH79 312 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 OR51E1Q8TCB6 317 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 TFGQ92734 400 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-222ENST00000545308 CIDECQ96AQ7 238 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-222ENST00000545308 CREB3L1Q96BA8 519 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 NRBF2Q96F24 287 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 PHYHIPLQ96FC7 376 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 RNF145Q96MT1 663 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 NRTNQ99748 197 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 UQCC2Q9BRT2 126 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 TM6SF2Q9BZW4 377 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 TCEAL2Q9H3H9 227 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-222ENST00000545308 CDC42EP4Q9H3Q1 356 aaKnown RBP2.76□□□□□ -1.97
SNHG1-222ENST00000545308 CISHQ9NSE2 258 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 PRR34Q9NV39 138 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 MCUBQ9NWR8 336 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 FLVCR2Q9UPI3 526 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 CROCCQ5TZA2 2017 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 SCN2AQ99250 2005 aa2.76□□□□□ -1.97
SNHG1-222ENST00000545308 AGRNO00468 2067 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 LOC100506127A0A0U1RQW1 187 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 H3BN98 237 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 H7C417 338 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 ETHE1O95571 254 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 HPRT1P00492 218 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 FABP3P05413 133 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 PGA4P0DJD7 388 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 PGA3P0DJD8 388 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 PGA5P0DJD9 388 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 ELK1P19419 428 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 RAB3BP20337 219 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 TEAD1P28347 426 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 CEACAM6P40199 344 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 CXCL5P42830 114 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 LHX2P50458 406 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 ZNF136P52737 540 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 ZNF121P58317 390 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-222ENST00000545308 PRR3P79522 188 aaKnown RBP2.75□□□□□ -1.97
SNHG1-222ENST00000545308 HMGCS1Q01581 520 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 ZNF266Q14584 549 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 IRF4Q15306 451 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 GOLGA7BQ2TAP0 167 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 Q3ZCU0 254 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 TMEM255AQ5JRV8 349 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 TPRG1LQ5T0D9 272 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 WDR82Q6UXN9 313 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 FBXW12Q6X9E4 464 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 Q6ZS92 163 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 SLC35D2Q76EJ3 337 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 ABHD13Q7L211 337 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 OR2W3Q7Z3T1 314 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 MRPL55Q7Z7F7 128 aaKnown RBP2.75□□□□□ -1.97
SNHG1-222ENST00000545308 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 OTUD6BQ8N6M0 293 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 TRIML2Q8N7C3 387 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 SPERTQ8NA61 448 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 GATSQ8NAP1 163 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 C11orf72Q8NBR9 251 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 CHST4Q8NCG5 386 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 FDCSPQ8NFU4 85 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 UBA3Q8TBC4 463 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 LRRC29Q8WV35 223 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 CTRCQ99895 268 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 AGMATQ9BSE5 352 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 HDHD3Q9BSH5 251 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-222ENST00000545308 CHRNA10Q9GZZ6 450 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 KIR3DX1Q9H7L2 352 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 NANOGQ9H9S0 305 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 UCK1Q9HA47 277 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 DMAC2Q9NW81 257 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 DDIT4Q9NX09 232 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 MTFP1Q9UDX5 166 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 OR51B4Q9Y5P0 310 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 PRRC2AP48634 2157 aaKnown RBP2.75□□□□□ -1.97
SNHG1-222ENST00000545308 INTS1Q8N201 2190 aaKnown RBP2.75□□□□□ -1.97
SNHG1-222ENST00000545308 FN1P02751 2386 aaKnown RBP2.75□□□□□ -1.97
SNHG1-222ENST00000545308 SPTBP11277 2137 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 PCM1Q15154 2024 aa2.75□□□□□ -1.97
SNHG1-222ENST00000545308 MPDZO75970 2070 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 NCOA6Q14686 2063 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-222ENST00000545308 C9J4A7 227 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 M0QYV0 167 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 PSMD11O00231 422 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 SS18L1O75177 396 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-222ENST00000545308 ENTPD5O75356 428 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 NELFEP18615 380 aaKnown RBP2.74□□□□□ -1.97
SNHG1-222ENST00000545308 OMGP23515 440 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 F8A1P23610 371 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 ACTR1BP42025 376 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 GPR4P46093 362 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 GNA12Q03113 381 aa2.74□□□□□ -1.97
SNHG1-222ENST00000545308 EIF4EBP2Q13542 120 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-222ENST00000545308 RGNQ15493 299 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms