RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 BCL3P20749 454 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 KISS1Q15726 138 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 SPIN3Q5JUX0 258 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 ZSCAN4Q8NAM6 433 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-216ENST00000544996 OR4M1Q8NGD0 313 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 OR5D18Q8NGL1 313 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 RPS4Y2Q8TD47 263 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 TMEM106AQ96A25 262 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-216ENST00000544996 UNKLQ9H9P5 680 aaKnown RBP12.91□□□□□ -0.34
CCDC78-216ENST00000544996 RHOFQ9HBH0 211 aa12.91□□□□□ -0.34
CCDC78-216ENST00000544996 TMEM89A2RUT3 159 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 MYL12BO14950 172 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 ANGPTL7O43827 346 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 ZNF737O75373 536 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 KDM4BO94953 1096 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 GABRR1P24046 479 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 TAS2R43P59537 309 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 PPP3R1P63098 170 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 ZNF146Q15072 292 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 TMEM200BQ69YZ2 307 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 LAIR2Q6ISS4 152 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 Q6YL49 198 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 OR8H2Q8N162 312 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 PPP1R35Q8TAP8 253 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 NRG4Q8WWG1 115 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 RGP1Q92546 391 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-216ENST00000544996 GHSRQ92847 366 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 SNX22Q96L94 193 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 GPER1Q99527 375 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 HMG20AQ9NP66 347 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 ERGIC3Q9Y282 383 aa12.9□□□□□ -0.34
CCDC78-216ENST00000544996 SF3B6Q9Y3B4 125 aaKnown RBP12.9□□□□□ -0.34
CCDC78-216ENST00000544996 SIRT4Q9Y6E7 314 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-216ENST00000544996 A0A0U1RQK1 487 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 RNASEK-C17orf49H0YIS7 233 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 SH2D1BO14796 132 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 NPFFO15130 113 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 CALCBP10092 127 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 DUSP1P28562 367 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 C21orf33P30042 268 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-216ENST00000544996 UBE2E1P51965 193 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 AQP4P55087 323 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 SNU13P55769 128 aaKnown RBP12.89□□□□□ -0.35
CCDC78-216ENST00000544996 EDDM3BP56851 147 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-216ENST00000544996 YIF1BQ5BJH7 314 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 DMKNQ6E0U4 476 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-216ENST00000544996 SATL1Q86VE3 508 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 TMEM86BQ8N661 226 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 SSMEM1Q8WWF3 244 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 TNFRSF14Q92956 283 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 SCN3BQ9NY72 215 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 TAS2R4Q9NYW5 299 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 IL36RNQ9UBH0 155 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 GSTK1Q9Y2Q3 226 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 POMT1Q9Y6A1 747 aa12.89□□□□□ -0.35
CCDC78-216ENST00000544996 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 TMEM82A0PJX8 343 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 PAHP00439 452 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 LALBAP00709 142 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 MELTFP08582 738 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 FBP1P09467 338 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 COMPP49747 757 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-216ENST00000544996 BMXP51813 675 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 DLX1P56177 255 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 WNT4P56705 351 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 ACSM1Q08AH1 577 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 KLRD1Q13241 179 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 GRK1Q15835 563 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 C6orf141Q5SZD1 244 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 ZNF529Q6P280 563 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 C16orf87Q6PH81 154 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 ZNF485Q8NCK3 441 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 MYDGFQ969H8 173 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 HEXA-AS1Q9H8Q6 139 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 EXOSC4Q9NPD3 245 aaKnown RBP12.88□□□□□ -0.35
CCDC78-216ENST00000544996 TMEM138Q9NPI0 162 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 FKBP14Q9NWM8 211 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 CKLFQ9UBR5 152 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 STAB1Q9NY15 2570 aa12.88□□□□□ -0.35
CCDC78-216ENST00000544996 A0A1W2PRD5 423 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 A0A1W2PRF3 423 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 A0A1W2PRM7 423 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 hADV38S2A0JD32 116 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 MEIOCA2RUB1 952 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 PTGES3LE9PB15 166 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 HAX1O00165 279 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 ALDOBP05062 364 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 HKR1P10072 659 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 ZP1P60852 638 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 MEF2CQ06413 473 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-216ENST00000544996 FOXL1Q12952 345 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 EDDM3AQ14507 147 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 Q499Y3 187 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms