RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 DHDHQ9UQ10 334 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 ZNF281Q9Y2X9 895 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 TRBV5-5A0A0J9YX44 114 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 A0A0U1RQK1 487 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 EFCAB10A6NFE3 127 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 HOXA3O43365 443 aaPredicted RBP9.34□□□□□ -0.91
YBX3-216ENST00000544622 ANGPTL7O43827 346 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 INMTO95050 263 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 ALDOBP05062 364 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 CD1AP06126 327 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 MELTFP08582 738 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 MYL12AP19105 171 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 POU3F4P49335 361 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 DLX6P56179 175 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 ERVFRD-1P60508 538 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 PRB3Q04118 309 aaPredicted RBP9.34□□□□□ -0.91
YBX3-216ENST00000544622 SPIN3Q5JUX0 258 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 C16orf87Q6PH81 154 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 ASCL4Q6XD76 172 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 LDLRAD3Q86YD5 345 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 PDZD9Q8IXQ8 264 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 OR8H2Q8N162 312 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 TMEM86BQ8N661 226 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 NANOGP1Q8N7R0 232 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 Q8NFD4 153 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 OR4M1Q8NGD0 313 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 OR51A2Q8NGJ7 313 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 OR5D13Q8NGL4 314 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 GHSRQ92847 366 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 EMG1Q92979 244 aaKnown RBP9.34□□□□□ -0.91
YBX3-216ENST00000544622 TMEM106AQ96A25 262 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 SLC25A28Q96A46 364 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 AJUBAQ96IF1 538 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 VCXQ9H320 206 aa9.34□□□□□ -0.91
YBX3-216ENST00000544622 A0A1W2PQ09 198 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 C17orf98A8MV24 154 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 GPX5O75715 221 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 HAND1O96004 215 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 CYB5AP00167 134 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 IGFBP3P17936 291 aaPredicted RBP9.33□□□□□ -0.92
YBX3-216ENST00000544622 IER3P46695 156 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 CAPZA1P52907 286 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 AQP4P55087 323 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 ACSM1Q08AH1 577 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 ZNF273Q14593 569 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 C6orf141Q5SZD1 244 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 NCR3LG1Q68D85 454 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 ELP2Q6IA86 826 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 TCF23Q7RTU1 214 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 PXT1Q8NFP0 134 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 BPIFB6Q8NFQ5 453 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 OR5D18Q8NGL1 313 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 NEK6Q9HC98 313 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 CHCHD3Q9NX63 227 aaKnown RBP9.33□□□□□ -0.92
YBX3-216ENST00000544622 POMT1Q9Y6A1 747 aa9.33□□□□□ -0.92
YBX3-216ENST00000544622 A0A0G2JK05 382 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 NPFFO15130 113 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 RBP4P02753 201 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 CD2P06729 351 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 OCM2P0CE71 109 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 CCL3L1P16619 93 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 RAB3AP20336 220 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 DUSP1P28562 367 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 ERP29P30040 261 aaKnown RBP9.32□□□□□ -0.92
YBX3-216ENST00000544622 SOX2P48431 317 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 ACTG1P63261 375 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 MEF2CQ06413 473 aaPredicted RBP9.32□□□□□ -0.92
YBX3-216ENST00000544622 KLRD1Q13241 179 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 MED21Q13503 144 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 BLMHQ13867 455 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 AWAT1Q58HT5 328 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 YIF1BQ5BJH7 314 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 Q6P435 159 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 AHSA2Q719I0 299 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 FAM185AQ8N0U4 392 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 ASCC1Q8N9N2 400 aaKnown RBP9.32□□□□□ -0.92
YBX3-216ENST00000544622 OR4S1Q8NGB4 309 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 TSEN15Q8WW01 171 aaKnown RBP9.32□□□□□ -0.92
YBX3-216ENST00000544622 GCDHQ92947 438 aaPredicted RBP9.32□□□□□ -0.92
YBX3-216ENST00000544622 ZDHHC16Q969W1 377 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 CDCA4Q9BXL8 241 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 ANKRD60Q9BZ19 345 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 PAK1IP1Q9NWT1 392 aaPredicted RBP9.32□□□□□ -0.92
YBX3-216ENST00000544622 TAS2R4Q9NYW5 299 aa9.32□□□□□ -0.92
YBX3-216ENST00000544622 SF3B6Q9Y3B4 125 aaKnown RBP9.32□□□□□ -0.92
YBX3-216ENST00000544622 TRBV5-7A0A0A0MS05 114 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 A0A1W2PPH5 198 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 ERICH4A6NGS2 130 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 GABRPO00591 440 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 OR2H2O95918 312 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 CDK1P06493 297 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 HCKP08631 526 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 OCMP0CE72 109 aaPredicted RBP9.31□□□□□ -0.92
YBX3-216ENST00000544622 CALCBP10092 127 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 PRKACAP17612 351 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 MYF6P23409 242 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 CFPP27918 469 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 OR3A1P47881 315 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms