RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 BTBD17A6NE02 478 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 AGPAT2O15120 278 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 MPIG6BO95866 241 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 AKR1C4P17516 323 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.32
CHFR-223ENST00000544268 CYCSP99999 105 aaKnown RBP13.08□□□□□ -0.32
CHFR-223ENST00000544268 SPINK14Q6IE38 97 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.32
CHFR-223ENST00000544268 ZNF385AQ96PM9 386 aaKnown RBP13.08□□□□□ -0.32
CHFR-223ENST00000544268 MRPL37Q9BZE1 423 aaKnown RBP13.08□□□□□ -0.32
CHFR-223ENST00000544268 METTL9Q9H1A3 318 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 PARP11Q9NR21 331 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 DEPPQ9NTK1 212 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 RAB22AQ9UL26 194 aa13.08□□□□□ -0.32
CHFR-223ENST00000544268 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 C5orf51A6NDU8 294 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 ZNF43P17038 809 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 CX3CR1P49238 355 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 RNASE10Q5GAN6 216 aaKnown RBP13.07□□□□□ -0.32
CHFR-223ENST00000544268 ABHD17BQ5VST6 288 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 FAHD2BQ6P2I3 314 aaPredicted RBP13.07□□□□□ -0.32
CHFR-223ENST00000544268 DEGS2Q6QHC5 323 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 TMPPEQ6ZT21 453 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 SLC22A24Q8N4F4 322 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 NKAIN3Q8N8D7 197 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 FAHD2AQ96GK7 314 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 FER1L6-AS2Q96M78 137 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
CHFR-223ENST00000544268 LRFN1Q9P244 771 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 SPENQ96T58 3664 aaKnown RBP13.07□□□□□ -0.32
CHFR-223ENST00000544268 AKAP13Q12802 2813 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 A0A087X0M5 115 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 A0A1B0GX30 115 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 M0R036 132 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 ZIC3O60481 467 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 DBHP09172 617 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 DAOP14920 347 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 ZNF20P17024 532 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 SULT1A2P50226 295 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 DSCR4P56555 118 aaPredicted RBP13.07□□□□□ -0.32
CHFR-223ENST00000544268 SLC25A47Q6Q0C1 308 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 IGF2-ASQ6U949 168 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 KCTD9Q7L273 389 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 OR5D14Q8NGL3 314 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 OR2AJ1Q8NGZ0 328 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 ROBO4Q8WZ75 1007 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 PRRT1Q99946 306 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 SLC2A8Q9NY64 477 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 GAB2Q9UQC2 676 aa13.07□□□□□ -0.32
CHFR-223ENST00000544268 A0A087WZY1 265 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 C13orf42A0A1B0GVH6 325 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 OR5H15A6NDH6 313 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 ZNF878C9JN71 531 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 TSTD3H0UI37 97 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 SULT1A1P50225 295 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 TMEM50BP56557 158 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 MEF2DQ14814 521 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 LINC00696Q6ZRV3 163 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 ZDHHC22Q8N966 263 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 PNLDC1Q8NA58 520 aaKnown RBP13.06□□□□□ -0.32
CHFR-223ENST00000544268 MARCH1Q8TCQ1 289 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 LYZL4Q96KX0 146 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 SIGLEC12Q96PQ1 595 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 S100A13Q99584 98 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 DKKL1Q9UK85 242 aa13.06□□□□□ -0.32
CHFR-223ENST00000544268 F5H5K5 113 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 NKX2-8O15522 239 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 CRTAPO75718 401 aaPredicted RBP13.05□□□□□ -0.32
CHFR-223ENST00000544268 CBR3O75828 277 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 NEURL1O76050 574 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 ERCC1P07992 297 aaPredicted RBP13.05□□□□□ -0.32
CHFR-223ENST00000544268 SERPINF1P36955 418 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 RHEBQ15382 184 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 RAET1LQ5VY80 246 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 ZNF529Q6P280 563 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 ZNF283Q8N7M2 679 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 OR1J1Q8NGS3 322 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 MISP3Q96FF7 219 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 OR2S2Q9NQN1 319 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 GLRX2Q9NS18 164 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 PLA2G3Q9NZ20 509 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 TP53TG5Q9Y2B4 290 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
CHFR-223ENST00000544268 LAMA5O15230 3695 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 NPIPB13A6NJU9 1138 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 LRRC3CA6NJW4 275 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 TMEM14DPA8MWL7 114 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 NPIPB4C9JG80 1138 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 H0YIZ8 118 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 GFRA3O60609 400 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 DUS4LO95620 317 aaKnown RBP13.05□□□□□ -0.32
CHFR-223ENST00000544268 ARG1P05089 322 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 SERPINA5P05154 406 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 LYL1P12980 280 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 WT1P19544 449 aaPredicted RBP13.05□□□□□ -0.32
CHFR-223ENST00000544268 CRIP3Q6Q6R5 217 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms