RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SEBOXQ9HB31 216 aaPredicted RBP13.74□□□□□ -0.21
CHD4-210ENST00000544040 PRDM7Q9NQW5 492 aa13.74□□□□□ -0.21
CHD4-210ENST00000544040 OR3A1P47881 315 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 BSXQ3C1V8 233 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 TMEM191AQ9H0A3 160 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 MELTFP08582 738 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 Q8IYB0 196 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 TMEM251Q8N6I4 163 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 PAM16Q9Y3D7 125 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 PCDHGA9Q9Y5G4 932 aaKnown RBP13.73□□□□□ -0.21
CHD4-210ENST00000544040 C11orf94C9JXX5 98 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 MFNGO00587 321 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 TCF21O43680 179 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 GCSHP23434 173 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 HSD17B13Q7Z5P4 300 aaPredicted RBP13.73□□□□□ -0.21
CHD4-210ENST00000544040 AURKAIP1Q9NWT8 199 aaPredicted RBP13.73□□□□□ -0.21
CHD4-210ENST00000544040 Q7L0L9 218 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 ZPBPQ9BS86 351 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 PPIL1Q9Y3C6 166 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
CHD4-210ENST00000544040 RAB29O14966 203 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 B4GALNT1Q00973 533 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 PSG5Q15238 335 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 OR4P4Q8NGL7 312 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 IL20Q9NYY1 176 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 ORM1P02763 201 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 ZNF32P17041 273 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 RPL30P62888 115 aaKnown RBP13.73□□□□□ -0.21
CHD4-210ENST00000544040 PABPC1L2AQ5JQF8 200 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 ZNF841Q6ZN19 808 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 SSMEM1Q8WWF3 244 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 PECRQ9BY49 303 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 SLC17A5Q9NRA2 495 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 MTCH2Q9Y6C9 303 aa13.73□□□□□ -0.21
CHD4-210ENST00000544040 ZNF205O95201 554 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 RPS4Y1P22090 263 aaKnown RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 FAM53BQ14153 422 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 AMER3Q8N944 861 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 DTD1Q8TEA8 209 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 MS4A7Q9GZW8 240 aaPredicted RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 RNF24Q9Y225 148 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 A0A1W2PN81 502 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 LYZL6O75951 148 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 METAP1P53582 386 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 TMEM30AQ9NV96 361 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 RALYQ9UKM9 306 aaKnown RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 FAM90A27PA6NNH2 459 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 ZNF137PP52743 207 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 VN1R17PQ8TDU5 208 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 URB1O60287 2271 aaKnown RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 SUMO3P55854 103 aaPredicted RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 OR10G8Q8NGN5 311 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 MVB12AQ96EY5 273 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 IP6K3Q96PC2 410 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 COA4Q9NYJ1 87 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 PRSS50Q9UI38 385 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 EXOGQ9Y2C4 368 aaKnown RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 ELOA3CA0A087WX78 387 aaPredicted RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 TMEM65Q6PI78 240 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 BCL7CQ8WUZ0 217 aaPredicted RBP13.72□□□□□ -0.21
CHD4-210ENST00000544040 C4orf45Q96LM5 186 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 OR4C12Q96R67 309 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 PCOLCE2Q9UKZ9 415 aa13.72□□□□□ -0.21
CHD4-210ENST00000544040 A0A1W2PPC4 97 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 CDKN2AP42771 156 aaKnown RBP13.71□□□□□ -0.21
CHD4-210ENST00000544040 SLC25A1P53007 311 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 SMUG1Q53HV7 270 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 C16orf47Q6ZP98 133 aaPredicted RBP13.71□□□□□ -0.21
CHD4-210ENST00000544040 SFTPA2Q8IWL1 248 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 OR5AU1Q8NGC0 362 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 LRRC61Q9BV99 259 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 FKBP11Q9NYL4 201 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 CLEC1BQ9P126 229 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 LOC389332A0A1B0GUA5 103 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 ANKRD20A5PA0PJZ0 165 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 HERVK_113P61574 105 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 OR2D3Q8NGH3 330 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 STARD4Q96DR4 205 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 SDK1Q7Z5N4 2213 aa13.71□□□□□ -0.21
CHD4-210ENST00000544040 P01737 135 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 HLA-GP17693 338 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 KIR2DS2P43631 304 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 FZD5Q13467 585 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 ZNF766Q5HY98 468 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 GSTZ1O43708 216 aaPredicted RBP13.71□□□□□ -0.22
CHD4-210ENST00000544040 GP1BAP07359 652 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 IER3P46695 156 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 CCR5P51681 352 aa13.71□□□□□ -0.22
CHD4-210ENST00000544040 DNAJB12Q9NXW2 375 aaKnown RBP13.71□□□□□ -0.22
CHD4-210ENST00000544040 YBX1P67809 324 aaKnown RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 GRAMD2BQ96HH9 432 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 TMEM204Q9BSN7 226 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 MANBALQ9NQG1 85 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 TECRQ9NZ01 308 aaKnown RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 TRBV5-4A0A0C4DH59 114 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 LINC01565O15544 149 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 TNFAIP6P98066 277 aaPredicted RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 ZNF793Q6ZN11 406 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms