RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 OSR2Q8N2R0 312 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF561Q8N587 486 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GAFA1Q96PS6 74 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NAA50Q9GZZ1 169 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 LPAR2Q9HBW0 351 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 KAAG1Q9UBP8 84 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4Q9UBX2 424 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF222Q9UK12 451 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IFITM5A6NNB3 132 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DVL1O14640 695 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SH2D1BO14796 132 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 PHF1O43189 567 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CRTAPO75718 401 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CHRM2P08172 466 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CD37P11049 281 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ARSBP15848 533 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 RANBP1P43487 201 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CAPZA1P52907 286 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CLDN12P56749 244 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 VBP1P61758 197 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NCS1P62166 190 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 COL10A1Q03692 680 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF146Q15072 292 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 LRRC10Q5BKY1 277 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CYB5R2Q6BCY4 276 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CLVS1Q8IUQ0 354 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 LINC01356Q8N9X3 169 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNRF1Q8ND25 227 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TMEM185AQ8NFB2 350 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ST8SIA4Q92187 359 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FAM46BQ96A09 425 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SDSLQ96GA7 329 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CST11Q9H112 138 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 BANF2Q9H503 90 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 STEAP1Q9UHE8 339 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ST3GAL6Q9Y274 331 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 A0A1W2PP11 408 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NOTOA8MTQ0 251 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 B4DSR2 109 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SIRPB1O00241 398 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SIGLEC5O15389 551 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FOXH1O75593 365 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 BPNT1O95861 308 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CLEC2LP0C7M8 214 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SELLP14151 372 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FOSL1P15407 271 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF44P15621 663 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NPY4RP50391 375 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CAV3P56539 151 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 LCN2P80188 198 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 PIGYQ3MUY2 71 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FAM166AQ6J272 317 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NR2C2APQ86WQ0 139 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ASCC1Q8N9N2 400 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR51T1Q8NGJ9 327 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 C1orf147Q96MC9 270 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SLC25A10Q9UBX3 287 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MAB21L2Q9Y586 359 aa12.05□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OTOGQ6ZRI0 2925 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF469Q96JG9 3925 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 AIPO00170 330 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DEGS1O15121 323 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NOL3O60936 208 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GABARAPO95166 117 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MPIG6BO95866 241 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR2H2O95918 312 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TGFAP01135 160 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MSMBP08118 114 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MGMTP16455 207 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NDUFB7P17568 137 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GABRR1P24046 479 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SERPINB10P48595 397 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 PDCD1Q15116 288 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 WDR25Q64LD2 544 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF841Q6ZN19 808 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TMEM104Q8NE00 496 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 Q8NFD4 153 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR51D1Q8NGF3 324 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SLC25A28Q96A46 364 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FAM3DQ96BQ1 224 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MSI2Q96DH6 328 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MRPS24Q96EL2 167 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SELENOIQ9C0D9 397 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 KCNK15Q9H427 330 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR5V1Q9UGF6 321 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DAPK2Q9UIK4 370 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TEX15Q9BXT5 2789 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ITPR3Q14573 2671 aa12.04□□□□□ -0.48
TNFRSF1A-216ENST00000543995 A0A0G2JK05 382 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GEMIN2O14893 280 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR7C1O76099 320 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 VSIG8P0DPA2 414 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SLC2A2P11168 524 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF16P17020 682 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 BLMHQ13867 455 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms