RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	SCRG1	O75711	98 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	FKBP2	P26885	142 aa	Known RBP	11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	NOVA1	P51513	510 aa	Known RBP	11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	RPS23	P62266	143 aa	Known RBP	11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	PIGY	Q3MUY2	71 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	ACER2	Q5QJU3	275 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	AKR7L	Q8NHP1	331 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	BORCS8	Q96FH0	119 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	ANGPTL4	Q9BY76	406 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	ZNF286A	Q9HBT8	521 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	RFNG	Q9Y644	331 aa		11.23	□□□□□ -0.61
DDX11-223	ENST00000542838	FAM24A	A6NFZ4	105 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	STARD6	P59095	220 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	H3F3A	P84243	136 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	CNN3	Q15417	329 aa	Known RBP	11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	FOXL2NB	Q6ZUU3	175 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	SLC35G3	Q8N808	338 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	OR10AD1	Q8NGE0	317 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	OR4D5	Q8NGN0	318 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	UCN2	Q96RP3	112 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	ULBP2	Q9BZM5	246 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	TMPRSS5	Q9H3S3	457 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	RBP2	P50120	134 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	AFF3	P51826	1226 aa	Known RBP	11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	LINC00469	Q8N7U9	141 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	CCDC71L	Q8N9Z2	235 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	OR2G3	Q8NGZ4	309 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	NTNG2	Q96CW9	530 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	ZNF837	Q96EG3	531 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	TMED3	Q9Y3Q3	217 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838		A0A1B0GW64	132 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	CD63	P08962	238 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	RPS10	P46783	165 aa	Known RBP	11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	HERV-K104	P61576	105 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	PDCD1	Q15116	288 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	OR2C3	Q8N628	320 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	CADM4	Q8NFZ8	388 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	SLAMF9	Q96A28	289 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	MOB3A	Q96BX8	217 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	BOD1	Q96IK1	185 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	TP53RK	Q96S44	253 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	ABHD14A	Q9BUJ0	271 aa		11.22	□□□□□ -0.61
DDX11-223	ENST00000542838	SHANK1	Q9Y566	2161 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	EYS	Q5T1H1	3165 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	CCDC85C	A6NKD9	419 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	MAS1L	P35410	378 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	CEBPG	P53567	150 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	CCL20	P78556	96 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	RAB30	Q15771	203 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	TMEM123	Q8N131	208 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	FBXL14	Q8N1E6	418 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	OSR2	Q8N2R0	312 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	ZFP62	Q8NB50	900 aa	Predicted RBP	11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	EDARADD	Q8WWZ3	215 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	BCO1	Q9HAY6	547 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	TRIO	O75962	3097 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	CNTRL	Q7Z7A1	2325 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	CEP290	O15078	2479 aa		11.21	□□□□□ -0.61
DDX11-223	ENST00000542838	TRBV23-1	A0A0A0MS06	115 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	RBFOX3	A6NFN3	312 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	CDRT15L2	A8MXV6	281 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	TP53I11	O14683	189 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	PPIH	O43447	177 aa	Known RBP	11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	IGHV2-70	P01814	119 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	AADAC	P22760	399 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	ATP6V0C	P27449	155 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	KIAA0141	Q14154	515 aa	Predicted RBP	11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	HEPN1	Q6WQI6	88 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	C1QL4	Q86Z23	238 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	SUMF1	Q8NBK3	374 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	OR14L1P	Q8NHC6	308 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	SNIP1	Q8TAD8	396 aa	Known RBP	11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	SPSB2	Q99619	263 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	CHRD	Q9H2X0	955 aa		11.21	□□□□□ -0.62
DDX11-223	ENST00000542838	IGKV1-12	A0A0C4DH73	117 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	NKX2-6	A6NCS4	301 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	DKK1	O94907	266 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	IGKV1D-12	P01611	117 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	LCAT	P04180	440 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	OMG	P23515	440 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	UCP3	P55916	312 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	ZNF266	Q14584	549 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	RAET1L	Q5VY80	246 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	LHFPL2	Q6ZUX7	228 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	SMDT1	Q9H4I9	107 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	TINAG	Q9UJW2	476 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	ST3GAL6	Q9Y274	331 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	CEP192	Q8TEP8	1941 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	ONECUT2	O95948	504 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	RAB2A	P61019	212 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	MR1	Q95460	341 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	YPEL4	Q96NS1	127 aa		11.2	□□□□□ -0.62
DDX11-223	ENST00000542838	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.2	□□□□□ -0.62

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