RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 GDNFP39905 211 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 MS4A2Q01362 244 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 GK3PQ14409 553 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 UBE2V2Q15819 145 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 FAM98BQ52LJ0 330 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 BCL2L15Q5TBC7 163 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 PRAMEF5Q5TYX0 476 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 C8orf86Q6ZUL3 223 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 P2RX4Q99571 388 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 APOL4Q9BPW4 351 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 MOB1AQ9H8S9 216 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 SEBOXQ9HB31 216 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 OR52A1Q9UKL2 312 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 LSM4Q9Y4Z0 139 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 R4GMQ9 66 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 EPPK1P58107 5090 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 CCL1P22362 96 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 GABRR1P24046 479 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 DGCR2P98153 550 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 ZNF91Q05481 1191 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 OR2W3Q7Z3T1 314 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 RTN4RL2Q86UN3 420 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 DHFR2Q86XF0 187 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 EGFL6Q8IUX8 553 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 HS3ST5Q8IZT8 346 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 TFAP2CQ92754 450 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 ZNF286AQ9HBT8 521 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 NDE1Q9NXR1 346 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 UBE2J1Q9Y385 318 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 TMEM14AQ9Y6G1 99 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 DNAH7Q8WXX0 4024 aa14.1□□□□□ -0.15
CLSTN3-214ENST00000542663 TENM2Q9NT68 2774 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 LEUTXA8MZ59 168 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 LY6LH3BQJ8 138 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 CST1P01037 141 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 RAP2AP10114 183 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 DUSP1P28562 367 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 ERP29P30040 261 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 OR3A1P47881 315 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 NPBWR2P48146 333 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 CXCR4P61073 352 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 SNAPC1Q16533 368 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 UTF1Q5T230 341 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 SLX4IPQ5VYV7 408 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 ZNF322Q6U7Q0 402 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 HEPN1Q6WQI6 88 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 SLC25A26Q70HW3 274 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 TRAPPC6BQ86SZ2 158 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 ZNF596Q8TC21 504 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 EMG1Q92979 244 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 FAM107BQ9H098 131 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 SLC25A19Q9HC21 320 aa14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 PAPOLBQ9NRJ5 636 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-214ENST00000542663 C3orf84H3BNL1 204 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 M0QZK8 103 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 MGST3O14880 152 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 CDK2P24941 298 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 LMO1P25800 156 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 CD34P28906 385 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 MYCNOSP40205 109 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 ARHGDIBP52566 201 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 P2RX3P56373 397 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 HLA-DRB5Q30154 266 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 TPTE2P1Q5T6R2 138 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 OR52W1Q6IF63 320 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 UNQ9370/PRO34162Q6UXP9 181 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 NOL4LQ96MY1 436 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 RBFOX1Q9NWB1 397 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 MRM2Q9UI43 246 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 SLC7A11Q9UPY5 501 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 PCDHGB5Q9Y5G0 923 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 SNX5Q9Y5X3 404 aa14.08□□□□□ -0.16
CLSTN3-214ENST00000542663 H3BSH0 61 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 BUB1B-PAK6H3BSN5 160 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 PRKACGP22612 351 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 OR3A4PP47883 348 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 TRIM25Q14258 630 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 ZNF146Q15072 292 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 ODF4Q2M2E3 257 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 KLHL30-AS1Q8NEE0 82 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 DUX3Q96PT4 197 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 CNN2Q99439 309 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 GAL3ST2Q9H3Q3 398 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 TVP23BQ9NYZ1 205 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 MOB4Q9Y3A3 225 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 HSPE1-MOB4S4R3N1 261 aa14.07□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A18PA6NE21 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A16PA6NEW6 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A20PA6NIJ5 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A9PA6NNJ1 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A12PA8MX19 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A5PA8MXJ8 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 ENTPD6O75354 484 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 SNRNP70P08621 437 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A15PP0C7V4 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A13PP0C7W8 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A14PP0C7W9 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM90A24PP0C7X0 464 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 CALCBP10092 127 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 BCL3P20749 454 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms