RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 OR2T10Q8NGZ9 312 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR1L1Q8NH94 360 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 CASTOR1Q8WTX7 329 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMED6Q8WW62 240 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 CDS1Q92903 461 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 SNAPC3Q92966 411 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 APOBEC3DQ96AK3 386 aaPredicted RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 RDH12Q96NR8 316 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 MS4A4EQ96PG1 132 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 MS4A10Q96PG2 267 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 STACQ99469 402 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 S1PR3Q99500 378 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 PYGO2Q9BRQ0 406 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 NIPSNAP3BQ9BS92 247 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 KRTAP4-3Q9BYR4 195 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 GANQ9H2C0 597 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 GLIPR2Q9H4G4 154 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 EXOSC3Q9NQT5 275 aaKnown RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 NMRK1Q9NWW6 199 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 OPTCQ9UBM4 332 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 PEF1Q9UBV8 284 aaKnown RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 PYCARDQ9ULZ3 195 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 FOXA2Q9Y261 457 aaPredicted RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 ACOT9Q9Y305 439 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TIMM22Q9Y584 194 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 PUS1Q9Y606 427 aaKnown RBP eCLIP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM231BA6NCW3 169 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 C2orf70A6NJV1 201 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF850A8MQ14 1090 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 C9JCJ5 164 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 K7N7A8 449 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC28A1O00337 649 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC1A7O00341 560 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 CCSO14618 274 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 POLR3GO15318 223 aaPredicted RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ATP6V0E1O15342 81 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ITM2AO43736 263 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 NPIPB7O75200 414 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRGV3P03979 118 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TFF1P04155 84 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 FCER2P06734 321 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 FGF4P08620 206 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 NEFHP12036 1026 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 PIPP12273 146 aaPredicted RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 HLA-DOBP13765 273 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 FUT1P19526 365 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 CBLN1P23435 193 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 AQP1P29972 269 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 RPL3P39023 403 aaKnown RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 GUCA1AP43080 201 aaPredicted RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 REG1BP48304 166 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ALDH3A2P51648 485 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 NDUFA8P51970 172 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 CDKN2DP55273 166 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 BIDP55957 195 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 HBA1P69905 142 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 MRPS34P82930 218 aaKnown RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 AESQ08117 197 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 BNIP2Q12982 314 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 HSPB3Q12988 150 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 EBI3Q14213 229 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 MELKQ14680 651 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 OXA1LQ15070 435 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 GPR68Q15743 365 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 MS4A18Q3C1V0 323 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ODF3L2Q3SX64 289 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 KRTAP13-3Q3SY46 172 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 KLHL12Q53G59 568 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM27BQ5VT28 67 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 C11orf63Q6NUN7 778 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 WDR82Q6UXN9 313 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM220AQ7Z4H9 259 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM179BQ7Z7N9 219 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TPRA1Q86W33 373 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 C11orf53Q8IXP5 236 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 RDH10Q8IZV5 341 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR8H3Q8N146 312 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 SETD9Q8NE22 299 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM71CQ8NEG0 241 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ACTL9Q8TC94 416 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TCP10LQ8TDR4 215 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM37Q8WXS4 190 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 THRSPQ92748 146 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 KRT35Q92764 455 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TOMM40LQ969M1 308 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 OTULINQ96BN8 352 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 OTUB1Q96FW1 271 aaPredicted RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 APIPQ96GX9 242 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC25A44Q96H78 314 aaPredicted RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF714Q96N38 554 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 SPAG8Q99932 426 aaPredicted RBP1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 NRIP2Q9BQI9 281 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF251Q9BRH9 671 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 SYT11Q9BT88 431 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 ANP32EQ9BTT0 268 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 TSGA10Q9BZW7 698 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 WDR13Q9H1Z4 485 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 EVA1AQ9H8M9 152 aa1.37□□□□□ -2.19
TRAV1-1-201ENST00000542354 MED4Q9NPJ6 270 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms