RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 LANCL2Q9NS86 450 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 FAM86C1Q9NVL1 165 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 LHFPL6Q9Y693 200 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 A0A087WWC5 75 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 FOXI3A8MTJ6 420 aaPredicted RBP12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 EREGO14944 169 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 ONECUT2O95948 504 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 FUT3P21217 361 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 EFNA3P52797 238 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 KISS1Q15726 138 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 OR11L1Q8NGX0 322 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 STT3BQ8TCJ2 826 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 FAM210BQ96KR6 192 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.34
AC005840.4-201ENST00000541242 CFAP54Q96N23 3096 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 KIAA2026Q5HYC2 2103 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 CABIN1Q9Y6J0 2220 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 CHD3Q12873 2000 aaKnown RBP12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 A0A087WZY1 265 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 CCDC163A0A0D9SF12 145 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 FRG2CA6NGY1 282 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 RER1O15258 196 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 SCAF4O95104 1147 aaKnown RBP12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 OPN1LWP04000 364 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 MYF5P13349 255 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 OR1D5P58170 312 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 HSF1Q00613 529 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 RUNX1Q01196 453 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 GPR157Q5UAW9 335 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 DTX1Q86Y01 620 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 PRSS58Q8IYP2 241 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 RTN4IP1Q8WWV3 396 aaPredicted RBP12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 DYRK2Q92630 601 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 C5orf34Q96MH7 638 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 NIPSNAP3BQ9BS92 247 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 UBE2ZQ9H832 354 aaPredicted RBP12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 FAM221AA4D161 298 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 A6NIZ1 184 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 A8MWP6 167 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 C9J4A7 227 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 LMO7DNF2Z398 122 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 H3BMH7 237 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 H3BML4 177 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 FOSL2P15408 326 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 RAP1BP61224 184 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 CFHR1Q03591 330 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 TLE3Q04726 772 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 PLCXD2Q0VAA5 305 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 C9orf40Q8IXQ3 194 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 M1APQ8TC57 530 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 SLC46A1Q96NT5 459 aa12.95□□□□□ -0.34
AC005840.4-201ENST00000541242 BLACEA4D250 179 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ALG1L2C9J202 215 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 CYTIPO60759 359 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 GZMBP10144 247 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 PAX1P15863 534 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ABCA11PQ4W5N1 156 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 BRICD5Q6PL45 260 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 C16orf47Q6ZP98 133 aaPredicted RBP12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 GRINAQ7Z429 371 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ADAMTS18Q8TE60 1221 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 TMEM171Q8WVE6 324 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 NAA60Q9H7X0 242 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 SLC7A11Q9UPY5 501 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 VDAC3Q9Y277 283 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 TP53TG5Q9Y2B4 290 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 IGSF23A1L1A6 192 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ZNF850A8MQ14 1090 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ST8SIA3O43173 380 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ZNF43P17038 809 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 NXPH1P58417 271 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 NKAIN1Q4KMZ8 207 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 CARD17Q5XLA6 110 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ZNF880Q6PDB4 577 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 MEX3BQ6ZN04 569 aaKnown RBP12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 ZNF721Q8TF20 911 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 PIGTQ969N2 578 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 BOD1Q96IK1 185 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 FAAP24Q9BTP7 215 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 MRPL37Q9BZE1 423 aaKnown RBP12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 PLEKHJ1Q9NW61 149 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 HSF4Q9ULV5 492 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
AC005840.4-201ENST00000541242 RALGAPA1Q6GYQ0 2036 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 ZNF705GA8MUZ8 300 aaPredicted RBP12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 TSPAN2O60636 221 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 NXPH3O95157 252 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 DDAH2O95865 285 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 COX5BP10606 129 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 DAP3P51398 398 aaKnown RBP12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 HNRNPKP61978 463 aaKnown RBP eCLIP12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 C20orf196Q8IYI0 205 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 TMEM123Q8N131 208 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
AC005840.4-201ENST00000541242 KIAA1456Q9P272 454 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms