RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 HCKP08631 526 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 SOX2P48431 317 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 CAPZA1P52907 286 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 RPL31P62899 125 aaKnown RBP10.76□□□□□ -0.69
LTBR-208ENST00000541005 SLC35A2P78381 396 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 BDH1Q02338 343 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 GUCA2AQ02747 115 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 COL10A1Q03692 680 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 DOC2BQ14184 412 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 RUSC1-AS1Q66K80 236 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 IZUMO2Q6UXV1 221 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 OR8H2Q8N162 312 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 NANOGP1Q8N7R0 232 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.76□□□□□ -0.69
LTBR-208ENST00000541005 PXT1Q8NFP0 134 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 OR51A2Q8NGJ7 313 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 TBC1D15Q8TC07 691 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 GHSRQ92847 366 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 TNFRSF14Q92956 283 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 LHX4Q969G2 390 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 RFT1Q96AA3 541 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 SPACA5Q96QH8 159 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 HMG20AQ9NP66 347 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 NOX4Q9NPH5 578 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 TAS2R4Q9NYW5 299 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 IL36RNQ9UBH0 155 aa10.76□□□□□ -0.69
LTBR-208ENST00000541005 TMEM82A0PJX8 343 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ANGPTL7O43827 346 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 GPX5O75715 221 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ATP6V1G2O95670 118 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ALDOBP05062 364 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 PRKACAP17612 351 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 IGFBP3P17936 291 aaPredicted RBP10.75□□□□□ -0.69
LTBR-208ENST00000541005 FSTP19883 344 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 PRTN3P24158 256 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ACSM1Q08AH1 577 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 BLMHQ13867 455 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 DEFB112Q30KQ8 113 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 Q499Y3 187 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 NCR3LG1Q68D85 454 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ELP2Q6IA86 826 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 C17orf107Q6ZR85 190 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 FAM185AQ8N0U4 392 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ZFP41Q8N8Y5 198 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ASCC1Q8N9N2 400 aaKnown RBP10.75□□□□□ -0.69
LTBR-208ENST00000541005 OR5D18Q8NGL1 313 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 OR13C5Q8NGS8 318 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 MYDGFQ969H8 173 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 SNX22Q96L94 193 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 MND1Q9BWT6 205 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 DUSP21Q9H596 190 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 SIRT7Q9NRC8 400 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 PAK1IP1Q9NWT1 392 aaPredicted RBP10.75□□□□□ -0.69
LTBR-208ENST00000541005 SCN3BQ9NY72 215 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 ERGIC3Q9Y282 383 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 LSM2Q9Y333 95 aaKnown RBP10.75□□□□□ -0.69
LTBR-208ENST00000541005 PCDHGB5Q9Y5G0 923 aa10.75□□□□□ -0.69
LTBR-208ENST00000541005 SOX21Q9Y651 276 aaPredicted RBP10.75□□□□□ -0.69
LTBR-208ENST00000541005 TENM1Q9UKZ4 2725 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 TRBV5-7A0A0A0MS05 114 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 A0A1W2PPH5 198 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 RNASEK-C17orf49H0YIS7 233 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 RBP4P02753 201 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 RNASE1P07998 156 aaKnown RBP10.74□□□□□ -0.69
LTBR-208ENST00000541005 MTNR1BP49286 362 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 BMXP51813 675 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 DLX6P56179 175 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 PPP3R1P63098 170 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 BAMBIQ13145 260 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 IRF3Q14653 427 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 TMEM200BQ69YZ2 307 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 ASCL4Q6XD76 172 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 C11orf42Q8N5U0 333 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 Q8NFD4 153 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 OR5D13Q8NGL4 314 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 THRSPQ92748 146 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 TMEM138Q9NPI0 162 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 GLS2Q9UI32 602 aa10.74□□□□□ -0.69
LTBR-208ENST00000541005 MDFIC2A0A1B0GVS7 189 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 GABRPO00591 440 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 MAGEB3O15480 346 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 PSPNO60542 156 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 INMTO95050 263 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 TMEM225BP0DP42 221 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 LMO1P25800 156 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 COMPP49747 757 aaPredicted RBP10.73□□□□□ -0.69
LTBR-208ENST00000541005 UBE2E1P51965 193 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 MEF2CQ06413 473 aaPredicted RBP10.73□□□□□ -0.69
LTBR-208ENST00000541005 ZNF273Q14593 569 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 SLC9A3R2Q15599 337 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 HCP5Q6MZN7 132 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 Q6YL49 198 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 GDPD3Q7L5L3 318 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 TCF23Q7RTU1 214 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 LDLRAD3Q86YD5 345 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 CHST4Q8NCG5 386 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 OR52N4Q8NGI2 321 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 IL36GQ9NZH8 169 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms