RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 AK3Q9UIJ7 227 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 HIF3AQ9Y2N7 669 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 KLHDC2Q9Y2U9 406 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 LSM5Q9Y4Y9 91 aaKnown RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 NOTCH4Q99466 2003 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 TRBV5-7A0A0A0MS05 114 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 IGLON5A6NGN9 336 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 OR2T8A6NH00 312 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 SLC17A2O00624 439 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 HNRNPA1P09651 372 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLIP1-214ENST00000540539 BCL6P41182 706 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 GALR1P47211 349 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 FOXL2P58012 376 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 TPPP2P59282 170 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 AGERQ15109 404 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 IAH1Q2TAA2 248 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-214ENST00000540539 KIAA0895LQ68EN5 471 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 LCN10Q6JVE6 187 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 TRAPPC6BQ86SZ2 158 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 Q8N976 141 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 OVCA2Q8WZ82 227 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 SLAMF6Q96DU3 332 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 LPAR5Q9H1C0 372 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF160Q9HCG1 818 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 BCL2L10Q9HD36 194 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 Q9N2K0 584 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 TBL2Q9Y4P3 447 aaKnown RBP8.28□□□□□ -1.08
CLIP1-214ENST00000540539 RNF114Q9Y508 228 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 C5orf42Q9H799 3197 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF840PA6NDX5 716 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 HSPB2A8KAH6 182 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 TMPRSS11DO60235 418 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 SERPINA7P05543 415 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 JMJD7P0C870 316 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF43P17038 809 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 AZU1P20160 251 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 GRPRP30550 384 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 GABRA2P47869 451 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 SRPXP78539 464 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 HSPB2Q16082 182 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 SLC16A9Q7RTY1 509 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 TMEM123Q8N131 208 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 FER1L6-AS1Q8NA97 138 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 OR51A4Q8NGJ6 313 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF417Q8TAU3 575 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ZDHHC16Q969W1 377 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ZG16BQ96DA0 208 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 STARD4Q96DR4 205 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 RSPRY1Q96DX4 576 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 BTF3L4Q96K17 158 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ZFYVE21Q9BQ24 234 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 TMEM38BQ9NVV0 291 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 C5AR2Q9P296 337 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 SLC13A4Q9UKG4 626 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 ENTPD2Q9Y5L3 495 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 C2orf16Q68DN1 1984 aa8.28□□□□□ -1.08
CLIP1-214ENST00000540539 IGHV2-26A0A0B4J1V2 119 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 SERINC4A6NH21 518 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 TAX1BP3O14907 124 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 CDS2O95674 445 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 MT-CO2P00403 227 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 F11P03951 625 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 IGFBP4P22692 258 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 ACRV1P26436 265 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 MPLP40238 635 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 LINC00310P59036 64 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 SMAGPQ0VAQ4 97 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 SLC17A1Q14916 467 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 PLPPR5Q32ZL2 321 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 LRRC10Q5BKY1 277 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 PHF19Q5T6S3 580 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 DNM1P34Q6PK57 102 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 COX15Q7KZN9 410 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 MRPL21Q7Z2W9 205 aaKnown RBP8.27□□□□□ -1.08
CLIP1-214ENST00000540539 CISD2Q8N5K1 135 aaKnown RBP8.27□□□□□ -1.08
CLIP1-214ENST00000540539 SLC38A9Q8NBW4 561 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 OR2Z1Q8NG97 314 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 PFN4Q8NHR9 129 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 SLC35G5Q96KT7 338 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 MCHR1Q99705 422 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 RTBDNQ9BSG5 229 aaPredicted RBP8.27□□□□□ -1.08
CLIP1-214ENST00000540539 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 CKLFQ9UBR5 152 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 MMP17Q9ULZ9 603 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 EYSQ5T1H1 3165 aa8.27□□□□□ -1.08
CLIP1-214ENST00000540539 A0A1B0GTH9 108 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 H7BYZ3 331 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 RAB29O14966 203 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 LINC01565O15544 149 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 TYMSP04818 313 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 FRKP42685 505 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-214ENST00000540539 PAFAH1B2P68402 229 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 EXT1Q16394 746 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 WBP2NLQ6ICG8 309 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 FAM166AQ6J272 317 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 VASH2Q86V25 355 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 COMMD2Q86X83 199 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms