RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 OR6C6A6NF89 314 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 FAM166BA8MTA8 275 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 DEDDO75618 318 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 CTSDP07339 412 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-210ENST00000539599 NHLH2Q02577 135 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 PJVKQ0ZLH3 352 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 OSR2Q8N2R0 312 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 CT55Q8WUE5 264 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 PRRX2Q99811 253 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 ZNF442Q9H7R0 627 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 GPR35Q9HC97 309 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 MMP26Q9NRE1 261 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 SLC2A9Q9NRM0 540 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 PRR14LQ5THK1 2151 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 DIDO1Q9BTC0 2240 aaKnown RBP12.15□□□□□ -0.46
UBE3B-210ENST00000539599 hCG_38984A0A1B0GV85 526 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 SFTA3P0C7M3 94 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 NR2C1P13056 603 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 AADACP22760 399 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 SRD5A2P31213 254 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 ZXDAP98168 799 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 MYPOPQ86VE0 399 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-210ENST00000539599 SVBPQ8N300 66 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 ZNF611Q8N823 705 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 SLAMF9Q96A28 289 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 ZNF488Q96MN9 340 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 SIGLEC12Q96PQ1 595 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 NRIP2Q9BQI9 281 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 CALHM2Q9HA72 323 aa12.15□□□□□ -0.46
UBE3B-210ENST00000539599 PHF1O43189 567 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-210ENST00000539599 RPL35P42766 123 aaKnown RBP12.14□□□□□ -0.47
UBE3B-210ENST00000539599 NAAAQ02083 359 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 PDZK1IP1Q13113 114 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 TMEM187Q14656 261 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 HFEQ30201 348 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 OR2V1Q8NHB1 315 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 SECTM1Q8WVN6 248 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 ADGRG7Q96K78 797 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 C20orf24Q9BUV8 137 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 PRRG4Q9BZD6 226 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 CST2P09228 141 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 FKBP2P26885 142 aaKnown RBP12.14□□□□□ -0.47
UBE3B-210ENST00000539599 STK11Q15831 433 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 HSD17B11Q8NBQ5 300 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 AKR1E2Q96JD6 320 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 SLC7A10Q9NS82 523 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 NECAP2Q9NVZ3 263 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 PARPBPQ9NWS1 579 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 DMXL1Q9Y485 3027 aa12.14□□□□□ -0.47
UBE3B-210ENST00000539599 LILRA1O75019 489 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 NGFP01138 241 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 BCL3P20749 454 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 AKR1D1P51857 326 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 ZNF616Q08AN1 781 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
UBE3B-210ENST00000539599 TSC22D1Q15714 1073 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 TMEM268Q5VZI3 342 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 UQCC3Q6UW78 93 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 OR56B2PQ8NGI1 322 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 SPSB1Q96BD6 273 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 PRO3102Q9H379 93 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 NAA60Q9H7X0 242 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 TECTAO75443 2155 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 DAOP14920 347 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
UBE3B-210ENST00000539599 PPT1P50897 306 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 GPM6AP51674 278 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 DHRS11Q6UWP2 260 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 TUSC5Q8IXB3 177 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 PSMF1Q92530 271 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 NTNG2Q96CW9 530 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 SMIM8Q96KF7 97 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 AIFM2Q9BRQ8 373 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 MAGT1Q9H0U3 335 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 RCC2Q9P258 522 aaKnown RBP12.13□□□□□ -0.47
UBE3B-210ENST00000539599 TIMM10BQ9Y5J6 103 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 DCHS1Q96JQ0 3298 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 RNASEK-C17orf49H0YIS7 233 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 TERTO14746 1132 aaKnown RBP12.13□□□□□ -0.47
UBE3B-210ENST00000539599 TNFSF12O43508 249 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 OMGP23515 440 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 ARF1P84077 181 aaKnown RBP12.13□□□□□ -0.47
UBE3B-210ENST00000539599 LINC00696Q6ZRV3 163 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 Q6ZSR3 168 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 UBALD1Q8TB05 177 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 CPT1CQ8TCG5 803 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 THOC3Q96J01 351 aaKnown RBP12.13□□□□□ -0.47
UBE3B-210ENST00000539599 LOXL2Q9Y4K0 774 aa12.13□□□□□ -0.47
UBE3B-210ENST00000539599 ESPL1Q14674 2120 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 C5orf49A4QMS7 147 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 IFNA21P01568 189 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 PET100P0DJ07 73 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 TDGF1P13385 188 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 FAM189A2Q15884 450 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 SLC35G3Q8N808 338 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-210ENST00000539599 MEMO1Q9Y316 297 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms