RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 SLC22A25Q6T423 547 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 C1QL4Q86Z23 238 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 C20orf196Q8IYI0 205 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 MAML2Q8IZL2 1156 aaPredicted RBP8.39□□□□□ -1.07
CDH13-204ENST00000539548 FAM24BQ8N5W8 94 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 CCDC71LQ8N9Z2 235 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 HSD17B11Q8NBQ5 300 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 OR10AD1Q8NGE0 317 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 OR5L1Q8NGL2 311 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 TCTEX1D2Q8WW35 142 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 DNASE2BQ8WZ79 361 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 REEP6Q96HR9 211 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 ZNF286AQ9HBT8 521 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 NIT2Q9NQR4 276 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 IL36GQ9NZH8 169 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 MED12Q93074 2177 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 IGHV3-15A0A0B4J1V0 119 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 hCG_1809904A0A1W2PP81 198 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 A0A1W2PR64 198 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 A0A1W2PRV1 198 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 AP4M1O00189 453 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 BCAT2O15382 392 aaPredicted RBP8.38□□□□□ -1.07
CDH13-204ENST00000539548 SYNGR3O43761 229 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 C1QL1O75973 258 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 ZNF205O95201 554 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 ARG1P05089 322 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 AFF3P51826 1226 aaKnown RBP8.38□□□□□ -1.07
CDH13-204ENST00000539548 GNMTQ14749 295 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 TGIF1Q15583 401 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 TMEM42Q69YG0 159 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 TMEM211Q6ICI0 200 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 OSR2Q8N2R0 312 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 OR2AE1Q8NHA4 323 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 CD300LFQ8TDQ1 290 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 BORCS8Q96FH0 119 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 BOD1Q96IK1 185 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 YPEL4Q96NS1 127 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 UCN2Q96RP3 112 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 ULBP2Q9BZM5 246 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 OR51M1Q9H341 326 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 PLSCR2Q9NRY7 297 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 FBXO7Q9Y3I1 522 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 KIAA1549Q9HCM3 1950 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 MUC3AQ02505 3323 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 IGKV1-12A0A0C4DH73 117 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 GEMIN2O14893 280 aaKnown RBP8.38□□□□□ -1.07
CDH13-204ENST00000539548 ZIC3O60481 467 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 CDS2O95674 445 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 NRASP01111 189 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 IGKV1D-12P01611 117 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 CST2P09228 141 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 OR8U8P0C7N1 319 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 S100PP25815 95 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 EIF2S3P41091 472 aaKnown RBP8.38□□□□□ -1.07
CDH13-204ENST00000539548 EWSR1Q01844 656 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH13-204ENST00000539548 OR8B8Q15620 311 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 SOHLH1Q5JUK2 328 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 ADAM5Q6NVV9 412 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 ZNF565Q8N9K5 539 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 OR8G5Q8NG78 346 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 OR11L1Q8NGX0 322 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 OR1F12Q8NHA8 337 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 FAM213BQ8TBF2 198 aa8.38□□□□□ -1.07
CDH13-204ENST00000539548 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
CDH13-204ENST00000539548 ASCC3Q8N3C0 2202 aaKnown RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 A0A1W2PPE2 198 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 PHF1O43189 567 aaPredicted RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 PDCD6O75340 191 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 IFNA17P01571 189 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 OR13C7P0DN81 318 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 GLI4P10075 376 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 LIFP15018 202 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 PPP1CCP36873 323 aaKnown RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 FUT6P51993 359 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 DSCR4P56555 118 aaPredicted RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 HERV-K104P61576 105 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 SRPXP78539 464 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 PCOLCEQ15113 449 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 KRTAP27-1Q3LI81 207 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 PIGYQ3MUY2 71 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 MRPL14Q6P1L8 145 aaKnown RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 TMEM182Q6ZP80 229 aaPredicted RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 ZNF100Q8IYN0 542 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 FAM185AQ8N0U4 392 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 FBXL14Q8N1E6 418 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 OR2C3Q8N628 320 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 DYRK2Q92630 601 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 POM121Q96HA1 1249 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 ZNF391Q9UJN7 358 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 CA14Q9ULX7 337 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 ST3GAL6Q9Y274 331 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 PTRH2Q9Y3E5 179 aaKnown RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 IGHV5-10-1A0A0J9YXX1 117 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 C3orf85A0A1B0GTC6 90 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 FAM221AA4D161 298 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 BTBD17A6NE02 478 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 RBFOX3A6NFN3 312 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 TRDCB7Z8K6 153 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms