RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	C17orf98	A8MV24	154 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RNASEK-C17orf49	H0YIS7	233 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CLIC3	O95833	236 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CSN2	P05814	226 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MELTF	P08582	738 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RAB3A	P20336	220 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	BDH1	Q02338	343 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	COL10A1	Q03692	680 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ST3GAL4	Q11206	333 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	KISS1	Q15726	138 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TMEM200B	Q69YZ2	307 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	DMKN	Q6E0U4	476 aa	Predicted RBP	10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ELP2	Q6IA86	826 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CRIP3	Q6Q6R5	217 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	C11orf42	Q8N5U0	333 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CHST4	Q8NCG5	386 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR13C9	Q8NGT0	318 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	DYRK2	Q92630	601 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GGH	Q92820	318 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	EMG1	Q92979	244 aa	Known RBP	10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SLAMF9	Q96A28	289 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FKBP14	Q9NWM8	211 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZNF281	Q9Y2X9	895 aa		10.08	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TRBV5-5	A0A0J9YX44	114 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828		F8VVB4	439 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828		F8VWA3	439 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828		H3BSH0	61 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SH2D1B	O14796	132 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MGST3	O14880	152 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	NPFF	O15130	113 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MAGEB3	O15480	346 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	HOXA3	O43365	443 aa	Predicted RBP	10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RGS9	O75916	674 aa	Predicted RBP	10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	NDUFA7	O95182	113 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	HAND1	O96004	215 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IER3	P46695	156 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MTNR1B	P49286	362 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	POU3F4	P49335	361 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ERVFRD-1	P60508	538 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZP1	P60852	638 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PAX5	Q02548	391 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	AWAT1	Q58HT5	328 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	YIF1B	Q5BJH7	314 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR2G6	Q5TZ20	316 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RUSC1-AS1	Q66K80	236 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ASCL4	Q6XD76	172 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	C17orf107	Q6ZR85	190 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GDPD3	Q7L5L3	318 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CDH26	Q8IXH8	852 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FAM185A	Q8N0U4	392 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PIP4P2	Q8N4L2	257 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR5R1	Q8NH85	324 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TSEN15	Q8WW01	171 aa	Known RBP	10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MEGF9	Q9H1U4	602 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	VCX3B	Q9H321	246 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	NCOR1P1	Q9H4R4	102 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SIRT7	Q9NRC8	400 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	C19orf12	Q9NSK7	152 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZNRD1	Q9P1U0	126 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR14J1	Q9UGF5	321 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FAM96B	Q9Y3D0	163 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	LINC00312	Q9Y6C7	94 aa		10.07	□□□□□ -0.8
CLTCL1-205	ENST00000538828	hADV38S2	A0JD32	116 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GNAO1	P09471	354 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZNF728	P0DKX0	622 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	BCL3	P20749	454 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	NPBWR2	P48146	333 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GTF2A1	P52655	376 aa	Predicted RBP	10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	DLX6	P56179	175 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	LAIR2	Q6ISS4	152 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	HCP5	Q6MZN7	132 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ASCC1	Q8N9N2	400 aa	Known RBP	10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	BEND2	Q8NDZ0	799 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR51T1	Q8NGJ9	327 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RGP1	Q92546	391 aa	Predicted RBP	10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TMEM106A	Q96A25	262 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZNF747	Q9BV97	191 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SLITRK2	Q9H156	845 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ELL3	Q9HB65	397 aa	Predicted RBP	10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TMEM138	Q9NPI0	162 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RBFOX1	Q9NWB1	397 aa	Known RBP	10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IL36G	Q9NZH8	169 aa		10.06	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IGKV1-12	A0A0C4DH73	117 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828		A0A0U1RQK1	487 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TMEM82	A0PJX8	343 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SPRY1	O43609	319 aa	Predicted RBP	10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	INMT	O95050	263 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IGKV1D-12	P01611	117 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TFF1	P04155	84 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CRYBA1	P05813	215 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	HCK	P08631	526 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PRKACA	P17612	351 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FST	P19883	344 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CFP	P27918	469 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	KCNJ3	P48549	501 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	HSPA13	P48723	471 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CEBPD	P49716	269 aa	Predicted RBP	10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	WNT4	P56705	351 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PPP3R1	P63098	170 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IL13RA2	Q14627	380 aa		10.05	□□□□□ -0.8

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