RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 DRAXINQ8NBI3 349 aaPredicted RBP10.82□□□□□ -0.68
CHFR-216ENST00000538235 TSPAN14Q8NG11 270 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 ST8SIA4Q92187 359 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 OR51E2Q9H255 320 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 INSIG2Q9Y5U4 225 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 A0A0G2JK05 382 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 SMIM30A4D0T7 59 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 TNFAIP8O95379 198 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 KNG1P01042 644 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 TMEM225BP0DP42 221 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 PRKACAP17612 351 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 GADD45AP24522 165 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 PRDX2P32119 198 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 ZNF93P35789 620 aaPredicted RBP10.81□□□□□ -0.68
CHFR-216ENST00000538235 OR10A3P58181 314 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 PPP3R1P63098 170 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 COL10A1Q03692 680 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 PLA2G7Q13093 441 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 KLF17Q5JT82 389 aaPredicted RBP10.81□□□□□ -0.68
CHFR-216ENST00000538235 FAM120AOSQ5T036 256 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 GLCCI1Q86VQ1 547 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 SAXO1Q8IYX7 474 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 FAM58AQ8N1B3 248 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 TMEM104Q8NE00 496 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 Q8NFD4 153 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 PXT1Q8NFP0 134 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 SHARPINQ9H0F6 387 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 C19orf12Q9NSK7 152 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 RASL12Q9NYN1 266 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 CLN8Q9UBY8 286 aa10.81□□□□□ -0.68
CHFR-216ENST00000538235 SOX21Q9Y651 276 aaPredicted RBP10.81□□□□□ -0.68
CHFR-216ENST00000538235 TRAV20A0A0B4J274 112 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 TRDV1A0A1B0GX56 115 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 CCRL2O00421 344 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 FOXH1O75593 365 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 HAND1O96004 215 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 MMP9P14780 707 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 PTGFRP43088 359 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 OR3A1P47881 315 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 IL13RA1P78552 427 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 ZNF146Q15072 292 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 HSD17B12Q53GQ0 312 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 C22orf42Q6IC83 251 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 OR10K2Q6IF99 312 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 BTN2A1Q7KYR7 527 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 MKXQ8IYA7 352 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 JAGN1Q8N5M9 183 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 ZSCAN4Q8NAM6 433 aaPredicted RBP10.8□□□□□ -0.68
CHFR-216ENST00000538235 LY6G5BQ8NDX9 201 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 TMEM185AQ8NFB2 350 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 OR4S1Q8NGB4 309 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 FCGR1BQ92637 280 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 SLC25A28Q96A46 364 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 YIPF6Q96EC8 236 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 CHST6Q9GZX3 395 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 DNTTIP1Q9H147 329 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 NEK6Q9HC98 313 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 RPUSD1Q9UJJ7 312 aaKnown RBP10.8□□□□□ -0.68
CHFR-216ENST00000538235 KCNS2Q9ULS6 477 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 GSTK1Q9Y2Q3 226 aa10.8□□□□□ -0.68
CHFR-216ENST00000538235 AK6Q9Y3D8 172 aaKnown RBP10.8□□□□□ -0.68
CHFR-216ENST00000538235 NKX6-3A6NJ46 265 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 SIRPB1O00241 398 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 OR2H2O95918 312 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 CLEC2LP0C7M8 214 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 JUNBP17275 347 aaPredicted RBP10.79□□□□□ -0.68
CHFR-216ENST00000538235 SRMP19623 302 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 MAPK3P27361 379 aaPredicted RBP10.79□□□□□ -0.68
CHFR-216ENST00000538235 ERVFRD-1P60508 538 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 FGF12P61328 243 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 QRFPP83859 136 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 PAX8Q06710 450 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 UNC119Q13432 240 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 ZNF273Q14593 569 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 C1orf100Q5SVJ3 147 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 ELP2Q6IA86 826 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 NLRC3Q7RTR2 1065 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 Q8N7P7 452 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 TPRX1Q8N7U7 411 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 PHYHIPQ92561 330 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 TBX15Q96SF7 602 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 GPER1Q99527 375 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 NUDT16L1Q9BRJ7 211 aaKnown RBP10.79□□□□□ -0.68
CHFR-216ENST00000538235 DCTN5Q9BTE1 182 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 CENPOQ9BU64 300 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 SIRPDQ9H106 197 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 TXNL4BQ9NX01 149 aaKnown RBP10.79□□□□□ -0.68
CHFR-216ENST00000538235 IL36GQ9NZH8 169 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 SLC25A10Q9UBX3 287 aaPredicted RBP10.79□□□□□ -0.68
CHFR-216ENST00000538235 MRPS28Q9Y2Q9 187 aaKnown RBP10.79□□□□□ -0.68
CHFR-216ENST00000538235 C2CD3Q4AC94 2353 aa10.79□□□□□ -0.68
CHFR-216ENST00000538235 A0A087WXM4 84 aa10.78□□□□□ -0.68
CHFR-216ENST00000538235 A0A0A6YYD4 124 aa10.78□□□□□ -0.68
CHFR-216ENST00000538235 A0A0B4J203 849 aa10.78□□□□□ -0.68
CHFR-216ENST00000538235 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
CHFR-216ENST00000538235 PPIAL4CA0A0B4J2A2 164 aa10.78□□□□□ -0.68
CHFR-216ENST00000538235 KIR2DS1A0A191URI9 304 aa10.78□□□□□ -0.68
CHFR-216ENST00000538235 NDUFA2O43678 99 aa10.78□□□□□ -0.68
CHFR-216ENST00000538235 CRLF1O75462 422 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms