RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TMEM50BP56557 158 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 SCN1BQ07699 218 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF79Q15937 498 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 FAM89BQ8N5H3 189 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 DEFB108BQ8NET1 73 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 OR10Z1Q8NGY1 313 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 RAB40AQ8WXH6 277 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 ERGIC1Q969X5 290 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 S100A16Q96FQ6 103 aaKnown RBP13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 CMTM3Q96MX0 182 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 OR14J1Q9UGF5 321 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 MRPS7Q9Y2R9 242 aaKnown RBP13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 USF3Q68DE3 2245 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 DYSFO75923 2080 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 TRAV18A0A075B6X5 111 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 RP2O75695 350 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 ETV6P41212 452 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 TAS2R20P59543 309 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 IKZF1Q13422 519 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 NKAPLQ5M9Q1 402 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 TMEM69Q5SWH9 247 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 FAM131AQ6UXB0 335 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 Q8IYB0 196 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 DYRK2Q92630 601 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 ABHD1Q96SE0 405 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 SOSTQ9BQB4 213 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 URM1Q9BTM9 101 aaKnown RBP13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 ADAM30Q9UKF2 790 aa13.13□□□□□ -0.31
SFSWAP-206ENST00000537582 A0A1B0GW55 424 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 ISPDA4D126 451 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 FABP12A6NFH5 140 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 HSPB6O14558 160 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 OR7C1O76099 320 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 HLA-DQB1P01920 261 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4L2P0CJ85 424 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4L3P0CJ86 424 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4L4P0CJ87 422 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4L5P0CJ88 424 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4L6P0CJ89 424 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4L7P0CJ90 424 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 IRF2P14316 349 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DAOP14920 347 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 GNB3P16520 340 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 CPT2P23786 658 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 BLVRBP30043 206 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 SSTR2P30874 369 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 BCAP31P51572 246 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 IL18Q14116 193 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 TRIM16LQ309B1 348 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 NHLRC3Q5JS37 347 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 Q6P435 159 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4L9Q6RFH8 374 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 C6orf201Q7Z4U5 140 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 FAM90A1Q86YD7 464 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 SNX29P2Q8IUI4 249 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 CHST4Q8NCG5 386 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 OR10R2Q8NGX6 335 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 NEU4Q8WWR8 484 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 MRPS24Q96EL2 167 aaKnown RBP13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 ARHGAP5-AS1Q96IT6 56 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 DUX4Q9UBX2 424 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 PLEKHA6Q9Y2H5 1048 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 KCNK7Q9Y2U2 307 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 CSMD2Q7Z408 3487 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
SFSWAP-206ENST00000537582 IGKV1D-17A0A075B6S4 117 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 FUOMA2VDF0 154 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 METTL21EPA6NDL7 271 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 RFPL4AA6NLU0 287 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 RFPL4AL1F8VTS6 287 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 SIRPB1O00241 398 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 XRCC3O43542 346 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 IGHV4-39P01824 125 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 PSG2P11465 335 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 AMY2BP19961 511 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 TALDO1P37837 337 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 RANBP1P43487 201 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 IFITM3Q01628 133 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF45Q02386 682 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF181Q2M3W8 571 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 HFEQ30201 348 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 SMIM21Q3B7S5 101 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 SPANXN2Q5MJ10 180 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 OR56B1Q8NGI3 324 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 RDH5Q92781 318 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 HPS1Q92902 700 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 PCDHB16Q9NRJ7 776 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 DNAJB11Q9UBS4 358 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 FBXO9Q9UK97 447 aaPredicted RBP13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 WIPI2Q9Y4P8 454 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 NPTNQ9Y639 398 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 TRAV24A0A0B4J272 114 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 TMEM235A6NFC5 223 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 LRRC30A6NM36 301 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms